docker-compose.localhost.yml

version: '3'

services:
  database:
    image: postgres:12.2
    volumes:
      - ../data/postgre/data:/var/lib/postgresql/data
    environment:
      POSTGRES_PASSWORD: fragalysis
      POSTGRES_USER: fragalysis
      POSTGRES_DB: frag
      PGDATA: /var/lib/postgresql/data/pgdata
    ports:
      - "5432:5432"
  graph:
    container_name: neo4j
    image: neo4j:3.5
    ports:
# Comment these two out in production
      - "7474:7474"
      - "7687:7687"
    ulimits:
      nofile:
        soft: 40000
        hard: 40000
    volumes:
      - ../data/neo4j/data:/data
      - ../data/neo4j/logs:/logs
    environment:
      - NEO4J_AUTH=none
      - NEO4J_dbms_memory_pagecache_size=4G
  web:
    container_name: web_dock
    image: xchem/fragalysis-stack:latest
    command: /bin/bash /code/launch-stack.sh
    volumes:
      - ../data/logs:/code/logs/
      - ../data/media:/code/media/
      - ../fragalysis-frontend:/code/frontend/
      - ../fragalysis-backend:/code/
    ports:
      - "8080:80"
    environment:
      POSTGRESQL_DATABASE: frag
      POSTGRESQL_USER: fragalysis
      POSTGRESQL_PASSWORD: fragalysis
      POSTGRESQL_HOST: database
      POSTGRESQL_PORT: 5432
    depends_on:
      - mysql
      - graph
  loader:
    container_name: loader
    image: xchem/fragalysis-stack:latest
    command: /bin/bash /code/docker-entrypoint.sh
    volumes:
      - ../data/input:/fragalysis/
      - ../data/media:/code/media/
      - ../fragalysis-frontend:/code/frontend/
      - ../fragalysis-backend:/code/
      - ../dls-fragalysis-stack-openshift/images/loader/docker-entrypoint.sh:/code/docker-entrypoint.sh
      - ../fragalysis-loader/run_loader.sh:/code/run_loader.sh
      - ../fragalysis-loader/loader.py:/code/loader.py
      - ../fragalysis-loader/test_entry.sh:/code/test_entry.sh
      - ../fragalysis-loader/wait-for-it.sh:/code/wait-for-it.sh
      - ../fragalysis-loader/database_check.py:/code/database_check.py
      - ../fragalysis-loader/tests:/code/tests
      - ../fragalysis-loader/loader:/code/loader
    environment:
      POSTGRESQL_DATABASE: frag
      POSTGRESQL_USER: fragalysis
      POSTGRESQL_PASSWORD: fragalysis
      POSTGRESQL_HOST: database
      POSTGRESQL_PORT: 5432
      DATA_ORIGIN: EXAMPLE
    depends_on:
      - mysql