x_structural_organization.yaml

# This is a YAML file.  Use a consistent number of spaces for indent.  Do not use tabs.
pattern_name: 'x_structural_organization_template.yaml' # Add a name used to identify the pattern here.

classes:
  'anatomical structure':'UBERON:0000061'
  'anatomical structure arrangement':'GO:0048532'
   # A dictionary of OWL classes, references in the pattern. Key = label (name); Value = OBO style ID (e.g. GO:1234567)

  
relations:
  'results in structural organization of':'RO:0002355' 
  # A dictionary of OWL object properties (relations, referenced in the pattern. Key = label (name); Value = OBO style ID.
  
vars: # A dictionary of class variable names (Keys = var name, value = range, specified as Manchester Syntax class expression.)
  # Manchester syntax class expression must be double-quoted.  
  # OWL entities referenced must be single quoted and in dictionaries.
  'target':"'anatomical structure'" # Please choose informative var names without special characters or spaces (apart from '_')

# Boilerplate - don't edit
data_list_vars:
  def_xrefs: "xsd:string"
  cross_references: "xsd:string"
  exact_syn: "xsd:string"
  narrow_syn: "xsd:string"
  broad_syn: "xsd:string"
  related_syn: "xsd:string"
  
name:
  text: "% structural organization"  # text with var slots specified as %s.
  vars:   # A list of var names. These don't need to be quoted. 
  # The order of variables = the order of intended insertion into slots.
    - 'target'
    
def: # See comments on name field
  text: "The process that contributes to the act of creating the structural organization of the %s. This process pertains to the physical shapin of a rudimetary structure."
  vars:
    - 'target'
  
  xrefs: # Boilerplate - don't edit
     value: def_xrefs

# Boilerplate - don't edit
xrefs: 
   value: cross_references

namespace: 
  text: 'biological_process'  # e.g. biological_process, quoting is optional

equivalentTo: 
  # text = manchester syntax class expression  with var slots specified as %s and owl entities 
  # Text must be double quoted or start with '>' return - indent.
  # specified as *single* quoted names.  All names must be in dict.  All vars must be in vars list.
  text: "'anatomical structure arrangement' and 'results in structural organization of' some %s" 
  vars:
    - 'target'

# Boilerplate - don't edit
exact_synonyms: 
   value: exact_syn
narrow_synonyms: 
   value: narrow_syn
broad_synonyms: 
   value: broad_syn
related_synonyms: 
   value: related_syn