From dfd3c234d7a3cc62675acedd1f20faa2686dd6b6 Mon Sep 17 00:00:00 2001 From: Trent Hauck Date: Tue, 10 Sep 2024 11:39:03 -0700 Subject: [PATCH] =?UTF-8?q?=E2=99=BB=EF=B8=8F=20Improve=20fastq=20filterin?= =?UTF-8?q?g?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- docs/register-scrnaseq-run.ipynb | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/register-scrnaseq-run.ipynb b/docs/register-scrnaseq-run.ipynb index c113ab3..47aa17b 100644 --- a/docs/register-scrnaseq-run.ipynb +++ b/docs/register-scrnaseq-run.ipynb @@ -58,7 +58,7 @@ "outputs": [], "source": [ "# The fastq files were staged during the workflow execution. We get them from the work directory\n", - "fastq_files = [f for f in Path('work').rglob('*') if f.is_symlink() and f.suffix == '.gz']" + "fastq_files = [f for f in Path('work').rglob('*.fastq.gz') if f.is_symlink()]" ] }, {