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seurat day 2 slide 'Comparison example' - reproducible figure #262

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kevinrue opened this issue Apr 22, 2024 · 0 comments
Open

seurat day 2 slide 'Comparison example' - reproducible figure #262

kevinrue opened this issue Apr 22, 2024 · 0 comments

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@kevinrue
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The qmd currently says source unknown. I think it was a figure I generated programmatically but in doubt, we should write an R script that generates that image:

  • import PBMC 1k
  • apply a standard lognormalise workflow and store the ggplot
  • apply SCT (new default is v2) and store the ggplot
  • cowplot the two ggplot into a single figure
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