Update python-app.yml

katerinakazantseva · May 17, 2024 · a09d1d0 · a09d1d0
1 parent 2e0e66e
commit a09d1d0
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/.github/workflows/python-app.yml b/.github/workflows/python-app.yml
@@ -38,5 +38,6 @@ jobs:
         conda env create -f environment.yml -n strainy
     - name: Test strainy
       run: |
+        conda init
         conda activate strainy
         ./strainy.py --gfa test_set/toy.gfa --fastq test_set/toy.fastq.gz --output out_strainy --mode hifi --threads 8