diff --git a/Workflow4Metabolomics Galaxy Documentation/W4Mteam/julien_saint-vanne.qmd b/Workflow4Metabolomics Galaxy Documentation/W4Mteam/julien_saint-vanne.qmd new file mode 100644 index 0000000..9f237d3 --- /dev/null +++ b/Workflow4Metabolomics Galaxy Documentation/W4Mteam/julien_saint-vanne.qmd @@ -0,0 +1,35 @@ +--- + title: "Julien Saint-Vanne" + image: "../images/julien_saint-vanne.png" + about: + template: trestles + links: + - icon: twitter + text: Twitter + href: "https://twitter.com/workflow4metabo" + - icon: github + text: Github + href: "https://github.com/jsaintvanne" +--- + +Young bioinformatician (yet) working on development of Shiny applications as principal activity. I love the development part of a tool because it is always a new challenge to share with diferent biologist and send them the tool that they need. + +I also play a lot of volley-ball and snow volley-ball during my free time ! I'm also the happy father of a little boy since 3 months and don't sleep a lot since but I'm full of love. + +## Education + +**Technical certificate** in laboratory analysis in 2012 + +**Master degree** in BioInfomatic in 2017 + +## Experience + +**CNRS** in Roscoff as a developper of Galaxy W4M tools for MSMS analysis (from 2018 to 2019) + +**ONIRIS - LABERCA** in Nantes as a reasearch engineer in development of Shiny application for specific compounds (2020) + +**EFS - UMR1236** in Rennes as a reasearch engineer to develop application to analyze multiparametric data in cytometry + +**ONIRIS - LABERCA** in Nantes as a research engineer to develop Shiny application, add a visualisation part in Galaxy and make some geek things in my lab. + + diff --git a/Workflow4Metabolomics Galaxy Documentation/W4Mteam/w4m.qmd b/Workflow4Metabolomics Galaxy Documentation/W4Mteam/w4m.qmd new file mode 100644 index 0000000..47012b3 --- /dev/null +++ b/Workflow4Metabolomics Galaxy Documentation/W4Mteam/w4m.qmd @@ -0,0 +1,12 @@ +--- +title: "Workflow4Metabolomics" +image: "../images/W4M.png" +about: + template: trestles + links: + - icon: twitter + text: Twitter + href: "https://twitter.com/workflow4metabo" +--- + +About this site diff --git a/Workflow4Metabolomics Galaxy Documentation/W4Mteam/yann_guitton.qmd b/Workflow4Metabolomics Galaxy Documentation/W4Mteam/yann_guitton.qmd new file mode 100644 index 0000000..61fcafb --- /dev/null +++ b/Workflow4Metabolomics Galaxy Documentation/W4Mteam/yann_guitton.qmd @@ -0,0 +1,12 @@ +--- +title: "Yann Guitton" +image: "../images/yann_guitton.png" +about: + template: trestles + links: + - icon: twitter + text: Twitter + href: "https://twitter.com/workflow4metabo" +--- + + About this site \ No newline at end of file diff --git a/Workflow4Metabolomics Galaxy Documentation/_quarto.yml b/Workflow4Metabolomics Galaxy Documentation/_quarto.yml index b28ec51..98884cb 100644 --- a/Workflow4Metabolomics Galaxy Documentation/_quarto.yml +++ b/Workflow4Metabolomics Galaxy Documentation/_quarto.yml @@ -26,18 +26,29 @@ website: icon: "house" - text: "Galaxy W4M" href: galaxyW4M.qmd + icon: "boxes" - text: "Contribute" href: contribute.qmd + icon: "pencil-square" - text: "Tools" + icon: "tools" menu: - text: "Tool 1" href: tool1.qmd - text: "Tool 2" href: tool2.qmd - text: "Events" - href: events.qmd + icon: "calendar-week" + menu: + - text: "" + - href: w4e2024.qmd + - text: "" + - href: w4e2023.qmd - text: "About" href: about.qmd + - text: "W4M Team" + href: listing_team.qmd + #background: success #foreground: danger diff --git a/Workflow4Metabolomics Galaxy Documentation/images/W4E_maps_Archamps.png b/Workflow4Metabolomics Galaxy Documentation/images/W4E_maps_Archamps.png new file mode 100644 index 0000000..4221487 Binary files /dev/null and b/Workflow4Metabolomics Galaxy Documentation/images/W4E_maps_Archamps.png differ diff --git a/Workflow4Metabolomics Galaxy Documentation/images/julien_saint-vanne.png b/Workflow4Metabolomics Galaxy Documentation/images/julien_saint-vanne.png new file mode 100644 index 0000000..95f29be Binary files /dev/null and b/Workflow4Metabolomics Galaxy Documentation/images/julien_saint-vanne.png differ diff --git a/Workflow4Metabolomics Galaxy Documentation/images/yann_guitton.png b/Workflow4Metabolomics Galaxy Documentation/images/yann_guitton.png new file mode 100644 index 0000000..6f0dde1 Binary files /dev/null and b/Workflow4Metabolomics Galaxy Documentation/images/yann_guitton.png differ diff --git a/Workflow4Metabolomics Galaxy Documentation/index.qmd b/Workflow4Metabolomics Galaxy Documentation/index.qmd index 285bb74..4d592c8 100644 --- a/Workflow4Metabolomics Galaxy Documentation/index.qmd +++ b/Workflow4Metabolomics Galaxy Documentation/index.qmd @@ -7,5 +7,6 @@ Proposition de squelette W4M : - première page : de présentation de ce qu'est w4m, qu'on fait un Galaxy, qu'on peut y contribuer, qu'on fait des events... - seconde page : on présente ce qu'est Galaxy et comment on a construit Galaxy w4m - troisième page : on présente comment contribuer aux outils de w4m -- quatrième page : une liste des outils et leur explication (ou on fait un lien vers un autre quarto pour ça ?) -- cinquième page : les events de w4m +- quatrième page : une liste des outils et leur explication, un menu déroulant avec chaque outil peut être ? (ou on fait un lien vers un autre quarto pour ça ?) +- cinquième page : les events de w4m (menu déroulant pourrait être pas mal peut être) +- sixième page : toutes les personnes de W4M avec une espèce de carte d'identité diff --git a/Workflow4Metabolomics Galaxy Documentation/listing_team.qmd b/Workflow4Metabolomics Galaxy Documentation/listing_team.qmd new file mode 100644 index 0000000..794b05b --- /dev/null +++ b/Workflow4Metabolomics Galaxy Documentation/listing_team.qmd @@ -0,0 +1,8 @@ +--- +title: "W4M team" +listing: + contents: W4Mteam + type: grid +--- + +About this site diff --git a/Workflow4Metabolomics Galaxy Documentation/events.qmd b/Workflow4Metabolomics Galaxy Documentation/w4e2023.qmd similarity index 71% rename from Workflow4Metabolomics Galaxy Documentation/events.qmd rename to Workflow4Metabolomics Galaxy Documentation/w4e2023.qmd index f73dea0..ebf2402 100644 --- a/Workflow4Metabolomics Galaxy Documentation/events.qmd +++ b/Workflow4Metabolomics Galaxy Documentation/w4e2023.qmd @@ -1,5 +1,5 @@ --- - title: "Events" + title: "Workflow4Experimenters 2023" --- This is a Quarto website. diff --git a/Workflow4Metabolomics Galaxy Documentation/w4e2024.qmd b/Workflow4Metabolomics Galaxy Documentation/w4e2024.qmd new file mode 100644 index 0000000..4ea0459 --- /dev/null +++ b/Workflow4Metabolomics Galaxy Documentation/w4e2024.qmd @@ -0,0 +1,26 @@ +--- + title: "Workflow4Experimenters 2024" +--- + +**Save the date!** + +Analyze your data with Galaxy and the Workflow4metabolomics infrastructure! + +The next Workflow4Experimenters session (W4E2024) will take place from **8 to 12 April 2024**. During this one-week course (entirely in English), you will learn how to use the W4M infrastructure and analyze your own LC-MS, GC-MS, or NMR data. + +This year an online pre-session is organised from **Monday 25 to Friday 29 March from 10 to 12 am**. + +Agenda and preregistration: [registration form](https://sondages.inrae.fr/index.php/688996?lang=fr) (Deadline 21/01/2024) + +- From March, 25th to 29th (10am to 12pm): online theoretical sessions (methods and tools) +- From April 8th to 12th : tutoring on your own data, at (Archamps). Practical information (more soon) - access map + +![Map of Archamps, Genève and its airport](images/W4E_maps_Archamps.png) + +**Invited speaker**: TBD + +**Scientific comitee**: C. Delporte (ULB, Bruxelles), C. Dalle (U.DAB IRBA, Brétigny-sur-Orge), J. Saint-Vanne, Y. Guitton (Laberca, Nantes), C. Joly, M. Pétéra, F. Giacomoni (PFEM INRA, Clermont-Ferrand), G. Le Corguillé, (Abims, Roscoff), B. Diémé (PFEM Université Clermont Auvergne), F. Souard (ULB, Bruxelles & Université de Grenoble), C. Canlet, M. Tremblay-Franco (Toxalim INRA, Toulouse), Ralf Weber (University of Birmingham) + +**Agenda and preregistration**: [registration form](https://sondages.inrae.fr/index.php/688996?lang=fr) (Deadline 21/01/2024) + +**Contact**: [w4e-organisation@groupes.renater.fr](w4e-organisation@groupes.renater.fr)