error: installing hnn-core

[hisacof]

Hello, I am trying to install hnn-core with following the instruction but I am getting error message below. I have not installed NEURON yet. I would be very much appreciative with any advice. Thank you.

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(base) C:\Users\fuj7ek>pip install hnn_core --no-deps
Collecting hnn_core
Using cached hnn-core-0.2.tar.gz (305 kB)
Installing build dependencies ... error
ERROR: Command errored out with exit status 1:
command: 'c:\users\fuj7ek\appdata\local\continuum\anaconda3\python.exe' 'c:\users\fuj7ek\appdata\local\continuum\anaconda3\lib\site-packages\pip' install --ignore-installed --no-user --prefix 'C:\Users\fuj7ek\AppData\Local\Temp\pip-build-env-8waem3lt\overlay' --no-warn-script-location --no-binary :none: --only-binary :none: -i https://pypi.org/simple -- 'setuptools>=40.8.0' 'NEURON >=7.7'
cwd: None
Complete output (4 lines):
Collecting setuptools>=40.8.0
Using cached setuptools-59.6.0-py3-none-any.whl (952 kB)
ERROR: Could not find a version that satisfies the requirement NEURON>=7.7 (from versions: none)
ERROR: No matching distribution found for NEURON>=7.7

WARNING: Discarding https://files.pythonhosted.org/packages/d6/f2/22db1d0b9dafa2e87d47505eb107cbe209a50cb73a2cea6f33e7eb670f05/hnn-core-0.2.tar.gz#sha256=9969e06c258daff1b1a3170aa24c5aab3a47e49c6ddcd71809ab51347654b0b9 (from https://pypi.org/simple/hnn-core/). Command errored out with exit status 1: 'c:\users\fuj7ek\appdata\local\continuum\anaconda3\python.exe' 'c:\users\fuj7ek\appdata\local\continuum\anaconda3\lib\site-packages\pip' install --ignore-installed --no-user --prefix 'C:\Users\fuj7ek\AppData\Local\Temp\pip-build-env-8waem3lt\overlay' --no-warn-script-location --no-binary :none: --only-binary :none: -i https://pypi.org/simple -- 'setuptools>=40.8.0' 'NEURON >=7.7' Check the logs for full command output.
Using cached hnn-core-0.1.tar.gz (100 kB)
Installing build dependencies ... error
ERROR: Command errored out with exit status 1:
command: 'c:\users\fuj7ek\appdata\local\continuum\anaconda3\python.exe' 'c:\users\fuj7ek\appdata\local\continuum\anaconda3\lib\site-packages\pip' install --ignore-installed --no-user --prefix 'C:\Users\fuj7ek\AppData\Local\Temp\pip-build-env-wy7si2e9\overlay' --no-warn-script-location --no-binary :none: --only-binary :none: -i https://pypi.org/simple -- 'setuptools>=40.8.0' 'NEURON >=7.7'
cwd: None
Complete output (4 lines):
Collecting setuptools>=40.8.0
Using cached setuptools-59.6.0-py3-none-any.whl (952 kB)
ERROR: Could not find a version that satisfies the requirement NEURON>=7.7 (from versions: none)
ERROR: No matching distribution found for NEURON>=7.7

WARNING: Discarding https://files.pythonhosted.org/packages/54/28/cf64b5efc913469e5ebfff344a9ae4b469bad629fed19995d53850422e58/hnn-core-0.1.tar.gz#sha256=50069745c349f3a4ed275eab8c6c952b5dc13c5cfb0c2a28bd32c0a491adcb56 (from https://pypi.org/simple/hnn-core/). Command errored out with exit status 1: 'c:\users\fuj7ek\appdata\local\continuum\anaconda3\python.exe' 'c:\users\fuj7ek\appdata\local\continuum\anaconda3\lib\site-packages\pip' install --ignore-installed --no-user --prefix 'C:\Users\fuj7ek\AppData\Local\Temp\pip-build-env-wy7si2e9\overlay' --no-warn-script-location --no-binary :none: --only-binary :none: -i https://pypi.org/simple -- 'setuptools>=40.8.0' 'NEURON >=7.7' Check the logs for full command output.
ERROR: Could not find a version that satisfies the requirement hnn_core (from versions: 0.1, 0.2)
ERROR: No matching distribution found for hnn_core

[jasmainak]

What operating system are you on?

[hisacof]

Windows From: Mainak Jas ***@***.***> Sent: Thursday, August 25, 2022 10:43 AM To: jonescompneurolab/hnn-core ***@***.***> Cc: Fujiwara, Hisako ***@***.***>; Author ***@***.***> Subject: Re: [jonescompneurolab/hnn-core] error: installing hnn-core (Issue #555) This email originated from an EXTERNAL sender to CCHMC. Proceed with caution when replying, opening attachments, or clicking links in this message. What operating system are you on? — Reply to this email directly, view it on GitHub<#555 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/AR6JKH24UMIRR6WXZABUI43V26A6ZANCNFSM57TMPXMQ>. You are receiving this because you authored the thread.Message ID: ***@***.******@***.***>>

[jasmainak]

Seems like our instructions are not great. You have two options:

• use WSL (Windows Subsystem Linux) ... probably the simplest. Then follow the regular instructions for Linux
• install Neuron first, make sure it is in the path by doing:

$ pip list | grep -i neuron

Then try running the command to install?

You are getting the problem because of this line:

hnn-core/pyproject.toml

Line 2 in df833b4

requires = ["setuptools>=40.8.0", 'NEURON >=7.7']

@cjayb would you recommend the same?

[hisacof]

are you doing this on WSL or regular Ubuntu on a laptop?

regular Ubuntu on a desktop

[jasmainak]

maybe this: jonescompneurolab/hnn#269 ?

But I somehow thought it is more applicable to WSL, not regular Ubuntu

[hisacof]

yup that's it. I guess I will try all over again.

[hisacof]

This error seems like a copy/paste error ... are you sure you pasted each line separately or used the magic command %paste

I did not use copy/paste. just hit tab to find the option.
from hnn_core.network_builder

[hisacof]

GUI is working now!