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How to ensure the number of test set samples? #10

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terry-r123 opened this issue Mar 15, 2024 · 0 comments

terry-r123 commented Mar 15, 2024

Thanks for your wonderful work!

I would like to use the original training and test sets, keeping the same sequences as in the original paper. I ran the file https://nbviewer.org/github/johli/aparent/blob/master/analysis/evaluate_aparent_random_mpra_legacy.ipynb and found that every library had the same test number. It seems different from the split in Figure 1. C in the paper.

Thanks for your time!
Best regards!

Original paper:

evaluate_aparent_random_mpra_legacy.ipynb:

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