signaling.name is working with netVisual_aggregate but is not with netVisual_individual

[CroixJeremy2]

Everything is in the title.
signaling.name = "my_personal_test" works with netVisual_aggregate(), but is not with netVisual_individual() somehow.

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Current workaround that I found:

I went into the source codes of each function, and it appears that in netVisual_aggregate(), you call netVisual_circle(title.name = paste0(signaling.name, " signaling pathway network"), ...). Here, signaling.name is correctly used in this function.

Whereas, in netVisual_individual(), there is no signaling.name that is called somewhere... Instead, I found that you call netVisual_circle(title.name = signalName_i, ...). So I modified manually to netVisual_circle(title.name = paste(signalName_i, signaling.name), ...), and it seems to work now.

But there might be some conflicts elsewhere because I don't know all the details of your functions. For sure, you have to modify these lines of code for layout == "hierarchy", layout == "spatial", or layout == "chord" if you use them (personally, I stick with layout == "circle"). Hopefully, there are no other conflicts except those ones that I spotted, and it is a good correction. If so, could you include that update in the next release please? Otherwise, could you correct the conflicts and update the patched version in the next release please?

Thanks in advance, and thanks for this amazing package,
Best regards,

[sqjin]

@CroixJeremy2 Thanks for pointing it out. However, netVisual_individual() is used to visualize individual network of a particular L-R pairs. To simply the title name, then there is no need to include the signaling names?