DESCRIPTION

Package: CellChat
Type: Package
Title: Inference and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics data 
Version: 2.1.2
Author: Suoqin Jin
Maintainer: Suoqin Jin <sqjin@whu.edu.cn>
Description: an open source R tool that infers, visualizes and analyzes the cell-cell communication networks from scRNA-seq and spatially resolved transcriptomics data.
Depends: R (>= 3.6.0),dplyr,igraph,ggplot2
License: GPL-3
Encoding: UTF-8
LazyData: TRUE
Imports:
    future,
    future.apply,
    pbapply,
    irlba,
    NMF (>= 0.23.0),
    ggalluvial,
    stringr,
    svglite,
    Matrix,
    ggrepel, 
    circlize (>= 0.4.12),
    RColorBrewer,
    cowplot,
    methods,
    ComplexHeatmap,
    RSpectra,
    Rcpp,
    reticulate,
    scales,
    sna,
    reshape2,
    FNN,
    shape,
    BiocGenerics,
    magrittr,
    patchwork,
    colorspace,
    plyr,
    ggpubr,
    ggnetwork, 
    BiocNeighbors,
    plotly,shiny,bslib
LinkingTo: Rcpp, RcppEigen
Suggests:
    rmarkdown, knitr, roxygen2, Seurat (>= 4.0.0), SingleCellExperiment, SummarizedExperiment, purrr,uwot,gg.gap,wordcloud,bsicons,presto,tidyverse,tidyr,rlang
RoxygenNote: 7.3.1
VignetteBuilder: knitr