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Special Case: Pubmed Abstract Headers dropped in bioc output #19

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creisle opened this issue Mar 16, 2023 · 0 comments
Open

Special Case: Pubmed Abstract Headers dropped in bioc output #19

creisle opened this issue Mar 16, 2023 · 0 comments
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creisle commented Mar 16, 2023

For the following articles, the content of the section headers "Aim", "Conclusion", etc. is dropped in the final bioc output which means we lose some context

https://pubmed.ncbi.nlm.nih.gov/26161928/

Input XML Proposed Parse Current Parse
<AbstractText Label="AIM" NlmCategory="OBJECTIVE">To investigate the impact of KRAS mutation variants on the activity of regorafenib in SW48 colorectal cancer cells.</AbstractText> AIM: To investigate the impact of KRAS mutation variants on the activity of regorafenib in SW48 colorectal cancer cells. To investigate the impact of KRAS mutation variants on the activity of regorafenib in SW48 colorectal cancer cells.
@creisle creisle self-assigned this Mar 16, 2023
creisle added a commit that referenced this issue Jun 6, 2024
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