Prerequisites_Badlands.txt

Prerequisites:
* Have Anaconda, Git installed


conda create --name pybad python=2.7.13 

source activate pybad

conda install jupyter h5py markupsafe numba=0.35.0 singledispatch backports_abc certifi jsonschema ipyparallel path.py matplotlib=2.0.2 pandas scipy=0.19.1 basemap=1.0.7 mpi4py plotly  Cython==0.20 

conda install PIL   

pip install ez_setup colorlover cmocean scikit-fuzzy pyevtk zmq git+https://github.com/badlands-model/triangle

git clone https://github.com/awickert/gFlex.git 
cd gFlex/
python setup.py install
cd ..


#In the Makefile depending on Artemis or local change:

LDFLAGS =$($LDFLAGS)" -L$(LIBDIR2)/ -shared"

#Save and run 

make all

#Now install this version of Bayelands to your python
cd -
pip install -e paralleltemp_Bayeslands/

#Add Bayeslands to your LD/PYTHON PAth
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:~/paralleltemp_Bayeslands/pyBadlands/libUtils
export PYTHON_PATH=$PYTHON_PATH:~/paralleltemp_Bayeslands/pyBadlands/libUtils