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The implementation could solve this in the spikeglx.Reader object from ibl-neuropixel.
We would create a new header field ordered that orders by shank, row, col (default NP1.0 order), and apply by default.
In the original order, shanks and rows are mixed. We were used to have non-contiguous shanks, but this is the first time we see this on the rows.
Example after sorting by shank, col, row:
The spike sorter has to operate on ordered channels, and the order used needs to be reproducible for all subsequent applications.
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