Zhu J, Sabanés Bové D, Stoilova J, Wang H, Collin F, Waddell A, Rucki P, Liao C, Li J (2023). tern: Create Common TLGs Used in Clinical Trials. -R package version 0.9.2.9000, https://github.com/insightsengineering/tern. +R package version 0.9.2.9002, https://github.com/insightsengineering/tern.
@Manual{, title = {tern: Create Common TLGs Used in Clinical Trials}, author = {Joe Zhu and Daniel {Sabanés Bové} and Jana Stoilova and Heng Wang and Francois Collin and Adrian Waddell and Pawel Rucki and Chendi Liao and Jennifer Li}, year = {2023}, - note = {R package version 0.9.2.9000}, + note = {R package version 0.9.2.9002}, url = {https://github.com/insightsengineering/tern}, }
na_str
analyze
summarize_row_groups
count_abnormal
count_abnormal_by_baseline
count_abnormal_by_marked
count_abnormal_by_worst_grade
count_abnormal_lab_worsen_by_baseline
count_cumulative
count_missed_doses
count_occurrences
count_occurrences_by_grade
summarize_occurrences_by_grade
summarize_patients_events_in_cols
count_patients_with_event
count_patients_with_flags
count_values
estimate_multinomial_response
estimate_proportion
h_tab_one_biomarker
estimate_incidence_rate
logistic_summary_by_flag
estimate_odds_ratio
estimate_proportion_diff
test_proportion_diff
summarize_ancova
summarize_change
summarize_glm_count
summarize_num_patients
analyze_num_patients
summarize_patients_exposure_in_cols
coxph_pairwise
tabulate_survival_subgroups
surv_time
surv_timepoint
get_indents_from_stats
summarize_occurrences
(named character) labels for the statistics (without indent).
character
(named integer) indent modifiers for the labels. Defaults to 0, which corresponds to the unmodified default behavior. Can be negative.
integer
(string) string used to replace all NA or empty values in the output.
string
NA
(named list) A named list containing one name-value pair where the name corresponds to the name of the statistics function that should be used in calculations and the value is the corresponding diff --git a/main/reference/afun_selected_stats.html b/main/reference/afun_selected_stats.html index 4fd99f1de6..1c5c2d778f 100644 --- a/main/reference/afun_selected_stats.html +++ b/main/reference/afun_selected_stats.html @@ -10,7 +10,7 @@ tern - 0.9.2.9000 + 0.9.2.9002
list
(character) statistics to select for the table.
(named character or list) formats for the statistics. See Details in analyze_vars for more +information on the "auto" setting.
analyze_vars
"auto"
(named integer) indent modifiers for the labels. Defaults to 0, which corresponds to the +unmodified default behavior. Can be negative.
(layout) input layout where analyses will be added to.
layout
(flag) whether this layout instruction should be applied within the existing layout structure if possible (TRUE, the default) or as a new top-level element (FALSE). Ignored if it would nest a split. @@ -220,24 +235,6 @@
flag
TRUE
FALSE
(named integer) indent modifiers for the labels. Defaults to 0, which corresponds to the -unmodified default behavior. Can be negative.
count_occurrences() returns a layout object suitable for passing to further layouting functions, or to rtables::build_table(). Adding this function to an rtable layout will add formatted rows containing the statistics from s_count_occurrences() to the table layout.
count_occurrences()
rtables::build_table()
rtable
s_count_occurrences()
summarize_occurrences() returns a layout object suitable for passing to further layouting functions, +or to rtables::build_table(). Adding this function to an rtable layout will add formatted content rows +containing the statistics from s_count_occurrences() to the table layout.
summarize_occurrences()
summarize_occurrences(): Layout-creating function which can take content function arguments +and additional format arguments. This function is a wrapper for rtables::summarize_row_groups().
rtables::summarize_row_groups()
