From a14443b3b08e4caaf9056faa6e033d1b7e32d5cc Mon Sep 17 00:00:00 2001 From: "Zhao, Junlue {MDBE~SOUTH SAN FRANCISCO}" Date: Tue, 29 Jun 2021 06:25:21 -0500 Subject: [PATCH] allowed Date and datetime in value_choices (#1226) * allowed Date and datetime in value_choices * ensure the timezone is shown in value_choices dropdown * used as.POSIXlt to get tzone; added datetime_to_char * spelling * WORDLIST * used format function * removed memoise * Update R/choices_labeled.R Co-Authored-By: Pagacz, Konrad {FIEV~Warsaw} * Update R/choices_labeled.R * detect when timezone is not present * Update inst/WORDLIST * roxygen2::roxygenize('.', roclets = c('rd', 'collate', 'namespace')) Co-authored-by: Junlue Zhao Co-authored-by: Pagacz, Konrad {FIEV~Warsaw} --- NEWS.md | 1 + R/choices_labeled.R | 18 +++++++++++++++++- man/CDISCData.Rd | 2 +- man/CDISCDataConnector.Rd | 2 +- man/CDISCDataset.Rd | 2 +- man/CDISCDatasetConnector.Rd | 2 +- man/CDISCFilteredData.Rd | 2 +- man/Callable.Rd | 2 +- man/CallableCode.Rd | 2 +- man/CallableFunction.Rd | 2 +- man/CallablePythonCode.Rd | 2 +- man/CodeClass.Rd | 2 +- man/DataAbstract.Rd | 2 +- man/DataConnection.Rd | 2 +- man/DatasetConnector.Rd | 2 +- man/FilteredData.Rd | 4 ++-- man/JoinKeys.Rd | 2 +- man/PythonCodeClass.Rd | 2 +- man/RelationalData.Rd | 2 +- man/RelationalDataConnector.Rd | 2 +- man/add_no_selected_choices.Rd | 2 +- man/as_cdisc.Rd | 2 +- man/as_cdisc_relational.Rd | 2 +- man/as_relational.Rd | 2 +- man/bookmarkableShinyApp.Rd | 2 +- man/callable_code.Rd | 2 +- man/callable_function.Rd | 2 +- man/cdisc_data.Rd | 2 +- man/cdisc_data_file.Rd | 2 +- man/cdisc_dataset.Rd | 2 +- man/cdisc_dataset_connector.Rd | 2 +- man/cdisc_dataset_connector_file.Rd | 2 +- man/cdisc_dataset_file.Rd | 2 +- man/choices_labeled.Rd | 2 +- man/choices_selected.Rd | 2 +- man/code_cdisc_dataset_connector.Rd | 2 +- man/code_dataset_connector.Rd | 2 +- man/csv_cdisc_dataset_connector.Rd | 2 +- man/csv_dataset_connector.Rd | 2 +- man/data_extract_spec.Rd | 2 +- man/data_label-set.Rd | 2 +- man/data_label.Rd | 2 +- man/dataset.Rd | 2 +- man/dataset_class.Rd | 4 ++-- man/dataset_connector.Rd | 2 +- man/dataset_connector_file.Rd | 2 +- man/dataset_file.Rd | 2 +- man/default_filter.Rd | 2 +- man/filter_spec.Rd | 2 +- man/filter_spec_internal.Rd | 2 +- man/fun_cdisc_dataset_connector.Rd | 2 +- man/fun_dataset_connector.Rd | 2 +- man/get_attrs.Rd | 2 +- man/get_cdisc_keys.Rd | 2 +- man/get_code.Rd | 2 +- man/get_dataname.Rd | 2 +- man/get_dataset.Rd | 2 +- man/get_dataset_label.Rd | 2 +- man/get_datasets.Rd | 2 +- man/get_key_duplicates.Dataset.Rd | 2 +- man/get_key_duplicates.Rd | 2 +- man/get_key_duplicates.data.frame.Rd | 2 +- man/get_key_duplicates_util.Rd | 2 +- man/get_keys.Rd | 2 +- man/get_labels.Rd | 2 +- man/get_raw_data.Rd | 2 +- man/get_variable_labels.Rd | 2 +- man/grapes-is_in-grapes.Rd | 2 +- man/init.Rd | 2 +- man/is.choices_selected.Rd | 2 +- man/is_pulled.Rd | 2 +- man/join_key.Rd | 2 +- man/join_keys.Rd | 2 +- man/keys.Rd | 2 +- man/load_dataset.Rd | 2 +- man/load_datasets.Rd | 2 +- man/log_app_usage.Rd | 2 +- man/module.Rd | 2 +- man/modules.Rd | 2 +- man/mutate_data.Rd | 2 +- man/mutate_dataset.Rd | 2 +- man/mutate_join_keys.Rd | 2 +- man/named_dataset.Rd | 2 +- man/named_dataset_connector.Rd | 2 +- man/named_dataset_file.Rd | 2 +- man/no_selected_as_NULL.Rd | 2 +- man/optionalSelectInput.Rd | 2 +- man/optionalSliderInput.Rd | 2 +- man/optionalSliderInputValMinMax.Rd | 2 +- man/python_cdisc_dataset_connector.Rd | 2 +- man/python_code.Rd | 2 +- man/python_dataset_connector.Rd | 2 +- man/raw_dataset.Rd | 2 +- man/raw_dataset_connector.Rd | 2 +- man/rcd_cdisc_dataset_connector.Rd | 2 +- man/rcd_connection.Rd | 2 +- man/rcd_data.Rd | 2 +- man/rcd_dataset_connector.Rd | 2 +- man/rds_cdisc_dataset_connector.Rd | 2 +- man/rds_dataset_connector.Rd | 2 +- man/read_script.Rd | 2 +- man/relational_dataset.Rd | 2 +- man/relational_dataset_connector.Rd | 2 +- man/relational_dataset_connector_file.Rd | 2 +- man/relational_dataset_file.Rd | 2 +- man/resolve_delayed.Rd | 2 +- man/resolve_delayed_expr.Rd | 2 +- man/rice_cdisc_dataset_connector.Rd | 2 +- man/rice_connection.Rd | 2 +- man/rice_data.Rd | 2 +- man/rice_dataset_connector.Rd | 2 +- man/root_modules.Rd | 2 +- man/script_cdisc_dataset_connector.Rd | 2 +- man/script_dataset_connector.Rd | 2 +- man/select_spec.Rd | 2 +- man/set_args.Rd | 2 +- man/set_keys.Rd | 2 +- man/snowflake_cdisc_dataset_connector.Rd | 2 +- man/snowflake_connection.Rd | 2 +- man/snowflake_data.Rd | 2 +- man/snowflake_dataset_connector.Rd | 2 +- man/split_by_sep.Rd | 2 +- man/srv_teal_with_splash.Rd | 2 +- man/stop_shiny.Rd | 2 +- man/teal_data.Rd | 2 +- man/teal_data_file.Rd | 2 +- man/teradata_cdisc_dataset_connector.Rd | 2 +- man/teradata_connection.Rd | 2 +- man/teradata_data.Rd | 2 +- man/teradata_dataset_connector.Rd | 2 +- man/ui_teal_with_splash.Rd | 2 +- man/updateOptionalSelectInput.Rd | 2 +- man/value_choices.Rd | 2 +- man/variable_choices.Rd | 2 +- 134 files changed, 152 insertions(+), 135 deletions(-) diff --git a/NEWS.md b/NEWS.md index 3b82ff4328..04d9d63d79 100644 --- a/NEWS.md +++ b/NEWS.md @@ -9,6 +9,7 @@ ### Bug fixes * Fixed an edge case error when creating a filter on variable with all missing values crashed the app. +* Fixed a bug that crashes app whenever a `Date` or `datetime` column is selected from a `filter_spec`. # teal 0.9.4 diff --git a/R/choices_labeled.R b/R/choices_labeled.R index 32fec4919f..072ec9d415 100644 --- a/R/choices_labeled.R +++ b/R/choices_labeled.R @@ -366,7 +366,23 @@ value_choices.data.frame <- function(data, # nolint ) } - choices <- if (length(var_choices) > 1 || is.character(df_choices[[1]]) || is.factor(df_choices[[1]])) { + choices <- if ( + length(var_choices) > 1 || + is.character(df_choices[[1]]) || + is.factor(df_choices[[1]]) || + inherits(df_choices[[1]], c("Date", "POSIXct", "POSIXlt", "POSIXt")) + ) { + df_choices <- dplyr::mutate_if( + df_choices, + .predicate = function(col) inherits(col, c("POSIXct", "POSIXlt", "POSIXt")), + .fun = function(col) { + if (is.null(attr(col, "tzone")) || all(attr(col, "tzone") == "")) { + format(trunc(col), "%Y-%m-%d %H:%M:%S") + } else { + format(trunc(col), "%Y-%m-%d %H:%M:%S %Z") + } + } + ) apply(df_choices, 1, paste, collapse = sep) } else { df_choices[[var_choices]] diff --git a/man/CDISCData.Rd b/man/CDISCData.Rd index 77e245953c..62eaaef82c 100644 --- a/man/CDISCData.Rd +++ b/man/CDISCData.Rd @@ -4,7 +4,7 @@ \alias{CDISCData} \title{Manage multiple \code{CDISCDataConnector}, \code{CDISCDatasetConnector} and \code{CDISCDataset} objects.} \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Class manages \code{CDISCDataConnector}, \code{CDISCDatasetConnector} and \code{CDISCDataset} objects and aggregate them in one collection. diff --git a/man/CDISCDataConnector.Rd b/man/CDISCDataConnector.Rd index e7604b33d6..6436217886 100644 --- a/man/CDISCDataConnector.Rd +++ b/man/CDISCDataConnector.Rd @@ -4,7 +4,7 @@ \alias{CDISCDataConnector} \title{Manage multiple and \code{DatasetConnector} of the same type.} \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Class manages \code{DatasetConnector} to specify additional dynamic arguments and to open/close connection. diff --git a/man/CDISCDataset.Rd b/man/CDISCDataset.Rd index 17bf98f0c7..cfc4e44536 100644 --- a/man/CDISCDataset.Rd +++ b/man/CDISCDataset.Rd @@ -4,7 +4,7 @@ \alias{CDISCDataset} \title{R6 Class representing a dataset with parent attribute} \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Any \code{data.frame} object can be stored inside this object. diff --git a/man/CDISCDatasetConnector.Rd b/man/CDISCDatasetConnector.Rd index da002d84fc..11fc78442a 100644 --- a/man/CDISCDatasetConnector.Rd +++ b/man/CDISCDatasetConnector.Rd @@ -10,7 +10,7 @@ The difference compared to the inherited class is a parent field that indicates name of the parent dataset. Note that the parent field might be empty (i.e. \code{character(0)}).} \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \section{Super class}{ \code{\link[teal:DatasetConnector]{teal::DatasetConnector}} -> \code{CDISCDatasetConnector} diff --git a/man/CDISCFilteredData.Rd b/man/CDISCFilteredData.Rd index 68e5e0c68f..a27ba2040f 100644 --- a/man/CDISCFilteredData.Rd +++ b/man/CDISCFilteredData.Rd @@ -5,7 +5,7 @@ \alias{CDISCFilteredData} \title{Class to encapsulate relational filtered datasets with its parents.} \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ The \code{CDISCFilteredData} class implements logic to filter a relational diff --git a/man/Callable.Rd b/man/Callable.Rd index dc1e43a045..61278bbfa3 100644 --- a/man/Callable.Rd +++ b/man/Callable.Rd @@ -6,7 +6,7 @@ Object that stores function name with its arguments. Methods to get call and run it.} \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \section{Methods}{ \subsection{Public methods}{ diff --git a/man/CallableCode.Rd b/man/CallableCode.Rd index ea24b9d194..2bcafd7d62 100644 --- a/man/CallableCode.Rd +++ b/man/CallableCode.Rd @@ -7,7 +7,7 @@ Object that stores code to reproduce an object. It includes methods to get or run the code and return the object.} \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \section{Super class}{ \code{\link[teal:Callable]{teal::Callable}} -> \code{CallableCode} diff --git a/man/CallableFunction.Rd b/man/CallableFunction.Rd index 2d89637574..8ac54ca7df 100644 --- a/man/CallableFunction.Rd +++ b/man/CallableFunction.Rd @@ -6,7 +6,7 @@ Object that stores function name with its arguments. Methods to get call and run it.} \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \section{Super class}{ \code{\link[teal:Callable]{teal::Callable}} -> \code{CallableFunction} diff --git a/man/CallablePythonCode.Rd b/man/CallablePythonCode.Rd index c9817328be..b163cdc5f4 100644 --- a/man/CallablePythonCode.Rd +++ b/man/CallablePythonCode.Rd @@ -4,7 +4,7 @@ \alias{CallablePythonCode} \title{A \code{CallablePythonCode} class of objects} \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \section{Super classes}{ \code{\link[teal:Callable]{teal::Callable}} -> \code{\link[teal:CallableFunction]{teal::CallableFunction}} -> \code{CallablePythonCode} diff --git a/man/CodeClass.Rd b/man/CodeClass.Rd index 51b291fd9b..ddd0030c2a 100644 --- a/man/CodeClass.Rd +++ b/man/CodeClass.Rd @@ -4,7 +4,7 @@ \alias{CodeClass} \title{Code Class} \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \examples{ cc <- teal:::CodeClass$new() diff --git a/man/DataAbstract.Rd b/man/DataAbstract.Rd index 586af0002f..0ac62e3d6a 100644 --- a/man/DataAbstract.Rd +++ b/man/DataAbstract.Rd @@ -4,7 +4,7 @@ \alias{DataAbstract} \title{\code{DataAbstract} class} \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Abstract class containing code for handling set of datasets. } diff --git a/man/DataConnection.Rd b/man/DataConnection.Rd index 39a2379f46..bd1a5f0916 100644 --- a/man/DataConnection.Rd +++ b/man/DataConnection.Rd @@ -7,7 +7,7 @@ Objects of this class store the connection to a data source. It can be a database or server (\code{RICE} or \code{SAICE}) connection.} \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \examples{ open_fun <- callable_function(data.frame) # define opening function diff --git a/man/DatasetConnector.Rd b/man/DatasetConnector.Rd index f71a906388..944f594027 100644 --- a/man/DatasetConnector.Rd +++ b/man/DatasetConnector.Rd @@ -11,7 +11,7 @@ Data can be pulled via the \code{pull} method and accessed directly through the \code{dataset} active binding. Pulled data inherits from the class \code{\link{Dataset}}} \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \examples{ diff --git a/man/FilteredData.Rd b/man/FilteredData.Rd index fb960340d8..5279aae67d 100644 --- a/man/FilteredData.Rd +++ b/man/FilteredData.Rd @@ -5,7 +5,7 @@ \alias{FilteredData} \title{Class to encapsulate filtered datasets} \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ The main purpose of this class is to provide a collection of reactive datasets, @@ -492,7 +492,7 @@ Set data attributes for the dataset \if{html}{\out{}} \if{latex}{\out{\hypertarget{method-get_variable_labels}{}}} \subsection{Method \code{get_variable_labels()}}{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#soft-deprecated}{\figure{lifecycle-soft-deprecated.svg}{options: alt='[Soft-deprecated]'}}}{\strong{[Soft-deprecated]}} +\ifelse{html}{\figure{lifecycle-soft-deprecated.svg}{options: alt='Soft-deprecated lifecycle'}}{\strong{Soft-deprecated}} Get labels of variables in the data \subsection{Usage}{ \if{html}{\out{
}}\preformatted{FilteredData$get_variable_labels(dataname, variables = NULL)}\if{html}{\out{
}} diff --git a/man/JoinKeys.Rd b/man/JoinKeys.Rd index 851aef0253..e17e1b097f 100644 --- a/man/JoinKeys.Rd +++ b/man/JoinKeys.Rd @@ -4,7 +4,7 @@ \alias{JoinKeys} \title{R6 Class to store relationships for joining datasets} \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} This class stores symmetric links between pairs of key-values (e.g. column A of dataset X can be joined with column B of dataset Y). This relationship diff --git a/man/PythonCodeClass.Rd b/man/PythonCodeClass.Rd index 9d5192f245..06c674c6cb 100644 --- a/man/PythonCodeClass.Rd +++ b/man/PythonCodeClass.Rd @@ -4,7 +4,7 @@ \alias{PythonCodeClass} \title{A \code{CallablePythonCode} class of objects} \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \section{Super class}{ \code{\link[teal:CodeClass]{teal::CodeClass}} -> \code{PythonCodeClass} diff --git a/man/RelationalData.Rd b/man/RelationalData.Rd index 04a1557d4b..45ca1f3cfe 100644 --- a/man/RelationalData.Rd +++ b/man/RelationalData.Rd @@ -4,7 +4,7 @@ \alias{RelationalData} \title{Manage multiple \code{RelationalDataConnector}, \code{DatasetConnector} and \code{Dataset} objects.} \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Class manages \code{RelationalDataConnector}, \code{DatasetConnector} and \code{Dataset} objects and aggregate them in one collection. diff --git a/man/RelationalDataConnector.Rd b/man/RelationalDataConnector.Rd index 1f535064da..6fe6bc1bd0 100644 --- a/man/RelationalDataConnector.Rd +++ b/man/RelationalDataConnector.Rd @@ -4,7 +4,7 @@ \alias{RelationalDataConnector} \title{Manage multiple and \code{DatasetConnector} of the same type.} \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Class manages \code{DatasetConnector} to specify additional dynamic arguments and to open/close connection. diff --git a/man/add_no_selected_choices.Rd b/man/add_no_selected_choices.Rd index 7ccfb79d95..49fb78c6ee 100644 --- a/man/add_no_selected_choices.Rd +++ b/man/add_no_selected_choices.Rd @@ -12,5 +12,5 @@ add_no_selected_choices(x, multiple = FALSE) \item{multiple}{(\code{logical}) whether multiple selections are allowed or not} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} } diff --git a/man/as_cdisc.Rd b/man/as_cdisc.Rd index 356cec99ff..c3a3fcacae 100644 --- a/man/as_cdisc.Rd +++ b/man/as_cdisc.Rd @@ -31,7 +31,7 @@ parent dataset name} (\code{CDISCDataset} or \code{CDISCDatasetConnector}) object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Convert a \code{Dataset(Connector)} object to a \code{CDISCDataset(Connector)} object diff --git a/man/as_cdisc_relational.Rd b/man/as_cdisc_relational.Rd index 7194bbaf71..f7e577756a 100644 --- a/man/as_cdisc_relational.Rd +++ b/man/as_cdisc_relational.Rd @@ -19,7 +19,7 @@ Label to describe the dataset} (\code{RelationalDataset} or \code{RelationalDatasetConnector}) object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#defunct}{\figure{lifecycle-defunct.svg}{options: alt='[Defunct]'}}}{\strong{[Defunct]}} +\ifelse{html}{\figure{lifecycle-defunct.svg}{options: alt='Defunct lifecycle'}}{\strong{Defunct}} } \details{ Convert a \verb{Named<...>} to a \verb{Relational<...>} diff --git a/man/as_relational.Rd b/man/as_relational.Rd index 053caeec9e..aa33801811 100644 --- a/man/as_relational.Rd +++ b/man/as_relational.Rd @@ -16,7 +16,7 @@ vector with primary keys} (\code{RelationalDataset} or \code{RelationalDatasetConnector}) object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#soft-deprecated}{\figure{lifecycle-soft-deprecated.svg}{options: alt='[Soft-deprecated]'}}}{\strong{[Soft-deprecated]}} +\ifelse{html}{\figure{lifecycle-soft-deprecated.svg}{options: alt='Soft-deprecated lifecycle'}}{\strong{Soft-deprecated}} } \details{ Convert a \verb{Named<...>} to a \verb{Relational<...>} diff --git a/man/bookmarkableShinyApp.Rd b/man/bookmarkableShinyApp.Rd index 1e5629d5d9..2521530b4e 100644 --- a/man/bookmarkableShinyApp.Rd +++ b/man/bookmarkableShinyApp.Rd @@ -19,7 +19,7 @@ one argument (\code{request})} \code{shinyApp} value } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} This is a customization of \code{shinyApp}. diff --git a/man/callable_code.Rd b/man/callable_code.Rd index fe7300df3d..f4d422c4b7 100644 --- a/man/callable_code.Rd +++ b/man/callable_code.Rd @@ -16,7 +16,7 @@ that they can't be modified.} \code{CallableCode} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Create \link{CallableCode} object to execute specific code and get reproducible call. } diff --git a/man/callable_function.Rd b/man/callable_function.Rd index 33f6dfa54c..cec63aeb25 100644 --- a/man/callable_function.Rd +++ b/man/callable_function.Rd @@ -14,7 +14,7 @@ any R function, directly by name or \code{character} string.} \code{CallableFunction} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Create \code{\link{CallableFunction}} object to execute specific function and get reproducible call. } diff --git a/man/cdisc_data.Rd b/man/cdisc_data.Rd index 03c848de7e..10e0095969 100644 --- a/man/cdisc_data.Rd +++ b/man/cdisc_data.Rd @@ -23,7 +23,7 @@ as provided in arguments. Check is run only if flag is true and preprocessing co a \code{CDISCData} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Function passes datasets to teal application with option to read preprocessing code and reproducibility checking. } \details{ diff --git a/man/cdisc_data_file.Rd b/man/cdisc_data_file.Rd index 50670c8f58..beaf44f6a1 100644 --- a/man/cdisc_data_file.Rd +++ b/man/cdisc_data_file.Rd @@ -17,7 +17,7 @@ reproducible code to re-create object} \code{CDISCData} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \examples{ file_example <- tempfile(fileext = ".R") diff --git a/man/cdisc_dataset.Rd b/man/cdisc_dataset.Rd index ace7607397..7af9180b3e 100644 --- a/man/cdisc_dataset.Rd +++ b/man/cdisc_dataset.Rd @@ -46,7 +46,7 @@ within another dataset.} (\code{CDISCDataset}) a dataset with connected metadata } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Function that creates \code{CDISCDataset} object } \examples{ diff --git a/man/cdisc_dataset_connector.Rd b/man/cdisc_dataset_connector.Rd index 09a03c9784..8736e20faf 100644 --- a/man/cdisc_dataset_connector.Rd +++ b/man/cdisc_dataset_connector.Rd @@ -55,7 +55,7 @@ within another dataset.} new \code{CDISCDatasetConnector} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Create \code{CDISCDatasetConnector} from \code{\link{callable_function}}. diff --git a/man/cdisc_dataset_connector_file.Rd b/man/cdisc_dataset_connector_file.Rd index 03654bbbaa..360f9befa6 100644 --- a/man/cdisc_dataset_connector_file.Rd +++ b/man/cdisc_dataset_connector_file.Rd @@ -13,7 +13,7 @@ cdisc_dataset_connector_file(path) \code{CDISCDatasetConnector} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Please note that the script has to end with a call creating desired object. The error will diff --git a/man/cdisc_dataset_file.Rd b/man/cdisc_dataset_file.Rd index 5df937755b..6ecc0e5494 100644 --- a/man/cdisc_dataset_file.Rd +++ b/man/cdisc_dataset_file.Rd @@ -15,7 +15,7 @@ cdisc_dataset_file(path, code = get_code(path)) (\code{CDISCDataset}) object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Please note that the script has to end with a call creating desired object. The error will be raised otherwise. } \examples{ diff --git a/man/choices_labeled.Rd b/man/choices_labeled.Rd index e183941958..143941907a 100644 --- a/man/choices_labeled.Rd +++ b/man/choices_labeled.Rd @@ -23,7 +23,7 @@ icons to the \code{\link[teal]{choices_selected}} drop down box} a named character vector } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} This is often useful for \code{\link[teal]{choices_selected}} as it marks up the dropdown boxes for \code{\link[shiny]{selectInput}}. } diff --git a/man/choices_selected.Rd b/man/choices_selected.Rd index c44c3d2aa3..2b0301557e 100644 --- a/man/choices_selected.Rd +++ b/man/choices_selected.Rd @@ -31,7 +31,7 @@ Object of class \code{choices_selected} and of type list which contains the spec \code{choices}, \code{selected}, \code{keep_order} and \code{fixed}. } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} Construct a single list containing available choices, the default selected value, and additional settings such as to order the choices with the selected elements appearing first or whether to block the user from making selections. Can be used in \code{ui} input elements diff --git a/man/code_cdisc_dataset_connector.Rd b/man/code_cdisc_dataset_connector.Rd index 2c8ad178bf..48da907834 100644 --- a/man/code_cdisc_dataset_connector.Rd +++ b/man/code_cdisc_dataset_connector.Rd @@ -44,7 +44,7 @@ are included to this object as local \code{vars} and they cannot be modified within another dataset.} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Create a \code{CDISCDatasetConnector} from a string of code with keys diff --git a/man/code_dataset_connector.Rd b/man/code_dataset_connector.Rd index 0ebf97eb39..bdedd0f0ff 100644 --- a/man/code_dataset_connector.Rd +++ b/man/code_dataset_connector.Rd @@ -45,7 +45,7 @@ are included to this object as local \code{vars} and they cannot be modified within another dataset.} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Create a \code{DatasetConnector} from a string of code. diff --git a/man/csv_cdisc_dataset_connector.Rd b/man/csv_cdisc_dataset_connector.Rd index 93cd2e3252..0629e45f09 100644 --- a/man/csv_cdisc_dataset_connector.Rd +++ b/man/csv_cdisc_dataset_connector.Rd @@ -46,7 +46,7 @@ additional arguments applied to pull function (\code{readr::read_delim}) by defa \code{delim = ","}.} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Create a \code{CDISCDatasetConnector} from \code{csv} (or general delimited) file diff --git a/man/csv_dataset_connector.Rd b/man/csv_dataset_connector.Rd index 27b79419c6..cd1570b479 100644 --- a/man/csv_dataset_connector.Rd +++ b/man/csv_dataset_connector.Rd @@ -42,7 +42,7 @@ additional arguments applied to pull function (\code{readr::read_delim}) by defa \code{delim = ","}.} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Create a \code{DatasetConnector} from \code{csv} (or general delimited file). diff --git a/man/data_extract_spec.Rd b/man/data_extract_spec.Rd index e8c8a3f130..554e3a4883 100644 --- a/man/data_extract_spec.Rd +++ b/man/data_extract_spec.Rd @@ -24,7 +24,7 @@ Please note that both select and filter cannot be empty at the same time.} with multiple keys selected in filter part.} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} The Data Extract input can be used to filter and select columns from a data set. This function enables such an input in teal. diff --git a/man/data_label-set.Rd b/man/data_label-set.Rd index ce676ad60a..b04bc12e3f 100644 --- a/man/data_label-set.Rd +++ b/man/data_label-set.Rd @@ -15,7 +15,7 @@ data_label(x) <- value modified \code{x} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} } \examples{ library(random.cdisc.data) diff --git a/man/data_label.Rd b/man/data_label.Rd index 2291d480bf..b786fadb45 100644 --- a/man/data_label.Rd +++ b/man/data_label.Rd @@ -13,7 +13,7 @@ data_label(data) (\code{character}) label or \code{NULL} if it's missing } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} } \examples{ library(random.cdisc.data) diff --git a/man/dataset.Rd b/man/dataset.Rd index 0b2b1e9c50..d1bc788e06 100644 --- a/man/dataset.Rd +++ b/man/dataset.Rd @@ -52,7 +52,7 @@ within another dataset.} \code{\link{Dataset}} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \examples{ # Simple example diff --git a/man/dataset_class.Rd b/man/dataset_class.Rd index c3191a17ac..dcc186c292 100644 --- a/man/dataset_class.Rd +++ b/man/dataset_class.Rd @@ -5,13 +5,13 @@ \alias{MAEDataset} \title{R6 Class representing a dataset with its attributes} \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Any \code{data.frame} object can be stored inside this object. Some attributes like colnames, dimension or column names for a specific type will be automatically derived. -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Any \code{MultiAssayExperiment} object can be stored inside this MAEDataset. Some attributes like colnames, dimension or column names for a specific type will diff --git a/man/dataset_connector.Rd b/man/dataset_connector.Rd index 62550ea778..71a3f92a82 100644 --- a/man/dataset_connector.Rd +++ b/man/dataset_connector.Rd @@ -51,7 +51,7 @@ within another dataset.} new \code{DatasetConnector} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Create \code{DatasetConnector} from \code{\link{callable_function}}. diff --git a/man/dataset_connector_file.Rd b/man/dataset_connector_file.Rd index 9b1d92bf49..0fc26d727a 100644 --- a/man/dataset_connector_file.Rd +++ b/man/dataset_connector_file.Rd @@ -13,7 +13,7 @@ dataset_connector_file(path) \code{DatasetConnector} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Please note that the script has to end with a call creating desired object. The error will diff --git a/man/dataset_file.Rd b/man/dataset_file.Rd index 0e1ec0c20b..ce434fbd78 100644 --- a/man/dataset_file.Rd +++ b/man/dataset_file.Rd @@ -15,7 +15,7 @@ dataset_file(path, code = get_code(path)) \code{Dataset} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Please note that the script has to end with a call creating desired object. The error will be raised otherwise. } \examples{ diff --git a/man/default_filter.Rd b/man/default_filter.Rd index a49929ea81..b6b50b3363 100644 --- a/man/default_filter.Rd +++ b/man/default_filter.Rd @@ -7,7 +7,7 @@ default_filter() } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} You can use it to refer to the variable's default filter state, which will be set when \code{FilteredData$set_data} is called. It can be used together with \code{teal::init}. diff --git a/man/filter_spec.Rd b/man/filter_spec.Rd index 37a68d73cc..a425a06acd 100644 --- a/man/filter_spec.Rd +++ b/man/filter_spec.Rd @@ -59,7 +59,7 @@ on top of this specific shiny \code{\link[shiny]{selectInput}}.} \code{filter_spec}-S3-class object or \code{delayed_filter_spec}-S3-class object. } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} It consists in choices and additionally the variable names for the choices } \details{ diff --git a/man/filter_spec_internal.Rd b/man/filter_spec_internal.Rd index 18cd4e8ed2..d040681a8e 100644 --- a/man/filter_spec_internal.Rd +++ b/man/filter_spec_internal.Rd @@ -122,7 +122,7 @@ TRUE if this filter was already consumed by the server function; FALSE otherwise \code{filter_spec} or \code{delayed_filter_spec} S3-class object. } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} This function returns a configuration for the \code{data_extract_input} module. This function covers the configuration of filtering datasets (so called \code{filter_spec}), which then is used to build the UI element in the \code{teal} app. diff --git a/man/fun_cdisc_dataset_connector.Rd b/man/fun_cdisc_dataset_connector.Rd index 85ccdcc1b2..1f01327ef0 100644 --- a/man/fun_cdisc_dataset_connector.Rd +++ b/man/fun_cdisc_dataset_connector.Rd @@ -58,7 +58,7 @@ are included to this object as local \code{vars} and they cannot be modified within another dataset.} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Create a \code{CDISCDatasetConnector} from \code{function} and its arguments diff --git a/man/fun_dataset_connector.Rd b/man/fun_dataset_connector.Rd index 3acb2dba02..c2c707b03e 100644 --- a/man/fun_dataset_connector.Rd +++ b/man/fun_dataset_connector.Rd @@ -54,7 +54,7 @@ are included to this object as local \code{vars} and they cannot be modified within another dataset.} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Create a \code{DatasetConnector} from \code{function} and its arguments. diff --git a/man/get_attrs.Rd b/man/get_attrs.Rd index f32cdfac99..d165468f50 100644 --- a/man/get_attrs.Rd +++ b/man/get_attrs.Rd @@ -16,7 +16,7 @@ get_attrs(x) named \code{list} of object attributes } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Get dataset attributes in form of named list. } \examples{ diff --git a/man/get_cdisc_keys.Rd b/man/get_cdisc_keys.Rd index 7db6babb58..1f12f6de31 100644 --- a/man/get_cdisc_keys.Rd +++ b/man/get_cdisc_keys.Rd @@ -13,7 +13,7 @@ get_cdisc_keys(dataname) \code{keys} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} } \examples{ get_cdisc_keys("ADSL") diff --git a/man/get_code.Rd b/man/get_code.Rd index da481c58be..7ece09d7ac 100644 --- a/man/get_code.Rd +++ b/man/get_code.Rd @@ -50,7 +50,7 @@ multiple files is joined together.} (\code{character}) code of import and preparation of data for teal application. } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Reads code from specified files or an R6 object. \itemize{ diff --git a/man/get_dataname.Rd b/man/get_dataname.Rd index 161efcede7..f21966e947 100644 --- a/man/get_dataname.Rd +++ b/man/get_dataname.Rd @@ -26,5 +26,5 @@ dataname (\code{character}) A given name for the dataset(s) it may not contain spaces } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } diff --git a/man/get_dataset.Rd b/man/get_dataset.Rd index a3fac1d6bf..3d1697eafe 100644 --- a/man/get_dataset.Rd +++ b/man/get_dataset.Rd @@ -24,7 +24,7 @@ get_dataset(x, dataname) (\code{Dataset}) } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Get dataset from \code{DatasetConnector} } diff --git a/man/get_dataset_label.Rd b/man/get_dataset_label.Rd index 44583350f0..87f8bb0a67 100644 --- a/man/get_dataset_label.Rd +++ b/man/get_dataset_label.Rd @@ -20,7 +20,7 @@ get_dataset_label(x) label (\code{character}) Label to describe the dataset } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \examples{ fun <- callable_function(data.frame) diff --git a/man/get_datasets.Rd b/man/get_datasets.Rd index 3d8e91a15a..08302d2f60 100644 --- a/man/get_datasets.Rd +++ b/man/get_datasets.Rd @@ -23,7 +23,7 @@ object containing datasets.} \code{list} or \code{Dataset} objects } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \examples{ diff --git a/man/get_key_duplicates.Dataset.Rd b/man/get_key_duplicates.Dataset.Rd index c6902d4ab9..7f42b0d48b 100644 --- a/man/get_key_duplicates.Dataset.Rd +++ b/man/get_key_duplicates.Dataset.Rd @@ -15,7 +15,7 @@ or \code{keys} object, which does have a \code{primary} element with a vector of names in \code{dataset} consisting the key. Optional, default: NULL} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ S3 method for get_key_duplicates. Uses the public API of diff --git a/man/get_key_duplicates.Rd b/man/get_key_duplicates.Rd index 016b767db3..b65e8f8815 100644 --- a/man/get_key_duplicates.Rd +++ b/man/get_key_duplicates.Rd @@ -17,7 +17,7 @@ names in \code{dataset} consisting the key. Optional, default: NULL} a \code{tibble} with variables consisting the key and \code{row_no} and \code{duplicates_count} columns } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ The information summary provides row numbers and number of duplicates diff --git a/man/get_key_duplicates.data.frame.Rd b/man/get_key_duplicates.data.frame.Rd index 85b0778289..d30f259b16 100644 --- a/man/get_key_duplicates.data.frame.Rd +++ b/man/get_key_duplicates.data.frame.Rd @@ -17,7 +17,7 @@ names in \code{dataset} consisting the key. Optional, default: NULL} a \code{tibble} with a short information summary } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ When the key argument is provided the function uses it to generate the summary, otherwise diff --git a/man/get_key_duplicates_util.Rd b/man/get_key_duplicates_util.Rd index 66f69f2aa2..1c11598b84 100644 --- a/man/get_key_duplicates_util.Rd +++ b/man/get_key_duplicates_util.Rd @@ -15,7 +15,7 @@ get_key_duplicates_util(dataframe, keys) \code{tibble} with a duplicate keys information summary } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Accepts a list of variable names - \code{keys}, which are treated as the diff --git a/man/get_keys.Rd b/man/get_keys.Rd index 5a7c7c23da..060e2fd433 100644 --- a/man/get_keys.Rd +++ b/man/get_keys.Rd @@ -26,7 +26,7 @@ get_keys(x, ...) (\code{character}) vector of column names } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Get dataset primary keys } \examples{ diff --git a/man/get_labels.Rd b/man/get_labels.Rd index d402e9921d..6980e44859 100644 --- a/man/get_labels.Rd +++ b/man/get_labels.Rd @@ -16,7 +16,7 @@ get_labels(data, fill = TRUE) labels } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} } \examples{ library(random.cdisc.data) diff --git a/man/get_raw_data.Rd b/man/get_raw_data.Rd index 979c439d91..f5fda707b3 100644 --- a/man/get_raw_data.Rd +++ b/man/get_raw_data.Rd @@ -28,7 +28,7 @@ Name of dataset to return raw data for.} if user doesn't specify \code{dataname} - (\code{get_raw_data} from all datasets). } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \examples{ diff --git a/man/get_variable_labels.Rd b/man/get_variable_labels.Rd index 3f69c6caa8..2d457a9859 100644 --- a/man/get_variable_labels.Rd +++ b/man/get_variable_labels.Rd @@ -19,7 +19,7 @@ columns are being used.} labels of the columns } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} } \examples{ library(random.cdisc.data) diff --git a/man/grapes-is_in-grapes.Rd b/man/grapes-is_in-grapes.Rd index 17121cb11b..d0053b3256 100644 --- a/man/grapes-is_in-grapes.Rd +++ b/man/grapes-is_in-grapes.Rd @@ -15,7 +15,7 @@ x \%is_in\% y \code{logical} vector length of \code{x} denoting if element was found in second list. } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} Checks if \code{x} element matches any of \code{y} element. If one of the arguments is a list then list elements are treated as whole - in this case list elements can be a vector, so it looks for equal element in second vector to be matched. diff --git a/man/init.Rd b/man/init.Rd index 846b0891c8..cd84d4572c 100644 --- a/man/init.Rd +++ b/man/init.Rd @@ -77,7 +77,7 @@ is then preferred to this function.} named list with server and ui function } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} End-users: This is the most important function for you to start a teal app that is composed out of teal modules. diff --git a/man/is.choices_selected.Rd b/man/is.choices_selected.Rd index 6286dfe6c9..d7d0959df4 100644 --- a/man/is.choices_selected.Rd +++ b/man/is.choices_selected.Rd @@ -10,5 +10,5 @@ is.choices_selected(x) \item{x}{object to check} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} } diff --git a/man/is_pulled.Rd b/man/is_pulled.Rd index b8050a9343..f0b401b978 100644 --- a/man/is_pulled.Rd +++ b/man/is_pulled.Rd @@ -22,7 +22,7 @@ is_pulled(x) (\code{logical}) \code{TRUE} if connector has been already pulled, else \code{FALSE}. } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} S3 method to determine if dataset is pulled (loaded). } \examples{ diff --git a/man/join_key.Rd b/man/join_key.Rd index cf05702397..66a4c7ff83 100644 --- a/man/join_key.Rd +++ b/man/join_key.Rd @@ -20,7 +20,7 @@ and \code{dataset_2}.} object of class \code{JoinKeySet} to be passed into \code{join_keys} function. } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \seealso{ \code{\link[=join_keys]{join_keys()}} diff --git a/man/join_keys.Rd b/man/join_keys.Rd index 2ef8759741..0d4fc40da3 100644 --- a/man/join_keys.Rd +++ b/man/join_keys.Rd @@ -13,7 +13,7 @@ join_keys(...) \code{JoinKeys} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Note that join keys are symmetric although the relationship only needs diff --git a/man/keys.Rd b/man/keys.Rd index b83bec3495..adf6105857 100644 --- a/man/keys.Rd +++ b/man/keys.Rd @@ -17,5 +17,5 @@ keys(primary, foreign, parent) keys } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#soft-deprecated}{\figure{lifecycle-soft-deprecated.svg}{options: alt='[Soft-deprecated]'}}}{\strong{[Soft-deprecated]}} +\ifelse{html}{\figure{lifecycle-soft-deprecated.svg}{options: alt='Soft-deprecated lifecycle'}}{\strong{Soft-deprecated}} } diff --git a/man/load_dataset.Rd b/man/load_dataset.Rd index 7d733dfc90..99febfa2ad 100644 --- a/man/load_dataset.Rd +++ b/man/load_dataset.Rd @@ -28,7 +28,7 @@ additional dynamic arguments passed to function which loads the data.} \code{x} with loaded \code{dataset} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Load data from connection. Function used on \code{\link{DatasetConnector}} and \code{\link{Dataset}} to obtain data from connection. } diff --git a/man/load_datasets.Rd b/man/load_datasets.Rd index aac48b72b5..2462de9009 100644 --- a/man/load_datasets.Rd +++ b/man/load_datasets.Rd @@ -38,7 +38,7 @@ If executed in the interactive session shiny app is opened to load the data. If shiny application - it returns shiny server module. } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \examples{ diff --git a/man/log_app_usage.Rd b/man/log_app_usage.Rd index da7ee7607a..0b23ff6cc8 100644 --- a/man/log_app_usage.Rd +++ b/man/log_app_usage.Rd @@ -24,7 +24,7 @@ log_app_usage( \item{pkg_meta}{package metadata fields. default values: \code{c("Package", "Title", "Version", "RemoteRef")}.} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} Analysis of Teal application utilization is a key component towards ongoing enhancements of the framework. The utilization logs provide source data for better understanding frequency and extent of use. diff --git a/man/module.Rd b/man/module.Rd index 28be154cdc..241a665b09 100644 --- a/man/module.Rd +++ b/man/module.Rd @@ -30,6 +30,6 @@ automatically passed to the server function as arguments \code{datasets}.} ui function.} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} Tab items allows you to add a shiny module to the teal app } diff --git a/man/modules.Rd b/man/modules.Rd index 53fcd195e3..4caa7e06f3 100644 --- a/man/modules.Rd +++ b/man/modules.Rd @@ -15,7 +15,7 @@ modules(label, ...) object of class \code{teal_modules} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} Modules collects a tree of \code{\link{module}} and \code{\link{modules}} objects. This is useful to define the navigation structure of a teal app. } diff --git a/man/mutate_data.Rd b/man/mutate_data.Rd index 8baab1d4e2..e398a083a4 100644 --- a/man/mutate_data.Rd +++ b/man/mutate_data.Rd @@ -35,7 +35,7 @@ within another dataset.} modified \code{x} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Code used in this mutation is not linked to particular but refers to all datasets. Consequence of this is that when using \code{get_code()} this diff --git a/man/mutate_dataset.Rd b/man/mutate_dataset.Rd index c4e47fe43b..07fb0ded49 100644 --- a/man/mutate_dataset.Rd +++ b/man/mutate_dataset.Rd @@ -65,7 +65,7 @@ Dataname to be mutated.} modified \code{x} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \examples{ library(random.cdisc.data) diff --git a/man/mutate_join_keys.Rd b/man/mutate_join_keys.Rd index 15b501fb73..8f19c7f10f 100644 --- a/man/mutate_join_keys.Rd +++ b/man/mutate_join_keys.Rd @@ -25,7 +25,7 @@ mutate_join_keys(x, dataset_1, dataset_2, val) modified \code{JoinKeys} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Mutate \code{JoinKeys} with a new values } \examples{ diff --git a/man/named_dataset.Rd b/man/named_dataset.Rd index f11eac0ca7..a2a9cbbef1 100644 --- a/man/named_dataset.Rd +++ b/man/named_dataset.Rd @@ -38,7 +38,7 @@ within another dataset.} \code{\link{Dataset}} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#soft-deprecated}{\figure{lifecycle-soft-deprecated.svg}{options: alt='[Soft-deprecated]'}}}{\strong{[Soft-deprecated]}} +\ifelse{html}{\figure{lifecycle-soft-deprecated.svg}{options: alt='Soft-deprecated lifecycle'}}{\strong{Soft-deprecated}} } \examples{ # Simple example diff --git a/man/named_dataset_connector.Rd b/man/named_dataset_connector.Rd index 3c3e43f457..767f1df778 100644 --- a/man/named_dataset_connector.Rd +++ b/man/named_dataset_connector.Rd @@ -47,7 +47,7 @@ within another dataset.} new \code{DatasetConnector} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#soft-deprecated}{\figure{lifecycle-soft-deprecated.svg}{options: alt='[Soft-deprecated]'}}}{\strong{[Soft-deprecated]}} +\ifelse{html}{\figure{lifecycle-soft-deprecated.svg}{options: alt='Soft-deprecated lifecycle'}}{\strong{Soft-deprecated}} } \details{ Create \code{DatasetConnector} from \code{\link{callable_function}}. diff --git a/man/named_dataset_file.Rd b/man/named_dataset_file.Rd index c501a0438c..b66611908c 100644 --- a/man/named_dataset_file.Rd +++ b/man/named_dataset_file.Rd @@ -15,7 +15,7 @@ named_dataset_file(path, code = get_code(path)) \code{Dataset} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#soft-deprecated}{\figure{lifecycle-soft-deprecated.svg}{options: alt='[Soft-deprecated]'}}}{\strong{[Soft-deprecated]}} +\ifelse{html}{\figure{lifecycle-soft-deprecated.svg}{options: alt='Soft-deprecated lifecycle'}}{\strong{Soft-deprecated}} } \examples{ # simple example diff --git a/man/no_selected_as_NULL.Rd b/man/no_selected_as_NULL.Rd index 3d3cd5f481..f117112f38 100644 --- a/man/no_selected_as_NULL.Rd +++ b/man/no_selected_as_NULL.Rd @@ -14,5 +14,5 @@ NULL, empty, "--no-selection"} the word or NULL } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} } diff --git a/man/optionalSelectInput.Rd b/man/optionalSelectInput.Rd index 6389ff39db..aa8194360f 100644 --- a/man/optionalSelectInput.Rd +++ b/man/optionalSelectInput.Rd @@ -52,7 +52,7 @@ returned by \code{\link[shiny]{helpText}}} e.g. 'auto', 'fit', '100px' or '75\%'} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} Hidden input widgets are useful to have the \code{input[[inputId]]} variable on available in the server function but no corresponding visual clutter from input widgets that provide only a single choice. diff --git a/man/optionalSliderInput.Rd b/man/optionalSliderInput.Rd index 3294ba4c30..250959f8ce 100644 --- a/man/optionalSliderInput.Rd +++ b/man/optionalSliderInput.Rd @@ -26,7 +26,7 @@ returned by \code{\link[shiny]{helpText}}} \item{...}{optional arguments to \code{sliderInput}} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} Hidden input widgets are useful to have the \code{input[[inputId]]} variable on available in the server function but no corresponding visual clutter from input widgets that provide only a single choice. diff --git a/man/optionalSliderInputValMinMax.Rd b/man/optionalSliderInputValMinMax.Rd index b12313498c..83fcb70774 100644 --- a/man/optionalSliderInputValMinMax.Rd +++ b/man/optionalSliderInputValMinMax.Rd @@ -29,7 +29,7 @@ returned by \code{\link[shiny]{helpText}}} \item{...}{optional arguments to \code{sliderInput}} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} The \code{\link{optionalSliderInput}} function needs three arguments to decided whether to hide the \code{sliderInput} widget or not. For teal modules we specify an optional slider input with one argument here called \code{value_min_max}. diff --git a/man/python_cdisc_dataset_connector.Rd b/man/python_cdisc_dataset_connector.Rd index 7ffeef1b1f..e2fc753bab 100644 --- a/man/python_cdisc_dataset_connector.Rd +++ b/man/python_cdisc_dataset_connector.Rd @@ -59,6 +59,6 @@ are included to this object as local \code{vars} and they cannot be modified within another dataset.} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Create a \code{CDISCDatasetConnector} from \code{.py} file or through python code supplied directly. } diff --git a/man/python_code.Rd b/man/python_code.Rd index e3b087e6c1..87a2fdd8ce 100644 --- a/man/python_code.Rd +++ b/man/python_code.Rd @@ -17,7 +17,7 @@ file that contains python Code that can be read using \code{reticulate::py_run_s (\code{PythonCodeClass}) object containing python code } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Create a python code object directly from python code or a script containing python code. } diff --git a/man/python_dataset_connector.Rd b/man/python_dataset_connector.Rd index 7959b9a104..4b3877f6f0 100644 --- a/man/python_dataset_connector.Rd +++ b/man/python_dataset_connector.Rd @@ -55,7 +55,7 @@ are included to this object as local \code{vars} and they cannot be modified within another dataset.} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Create a \code{DatasetConnector} from \code{.py} file or through python code supplied directly. } \details{ diff --git a/man/raw_dataset.Rd b/man/raw_dataset.Rd index 67a0d50214..351b94bc14 100644 --- a/man/raw_dataset.Rd +++ b/man/raw_dataset.Rd @@ -13,7 +13,7 @@ raw_dataset(x) \code{\link{Dataset}} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#defunct}{\figure{lifecycle-defunct.svg}{options: alt='[Defunct]'}}}{\strong{[Defunct]}} +\ifelse{html}{\figure{lifecycle-defunct.svg}{options: alt='Defunct lifecycle'}}{\strong{Defunct}} } \examples{ # Simple example diff --git a/man/raw_dataset_connector.Rd b/man/raw_dataset_connector.Rd index 061fc7d814..1df5b48145 100644 --- a/man/raw_dataset_connector.Rd +++ b/man/raw_dataset_connector.Rd @@ -14,7 +14,7 @@ function with necessary arguments set to fetch data from connection.} new \code{DatasetConnector} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#defunct}{\figure{lifecycle-defunct.svg}{options: alt='[Defunct]'}}}{\strong{[Defunct]}} +\ifelse{html}{\figure{lifecycle-defunct.svg}{options: alt='Defunct lifecycle'}}{\strong{Defunct}} } \details{ Create \code{DatasetConnector} from \code{\link{callable_function}}. diff --git a/man/rcd_cdisc_dataset_connector.Rd b/man/rcd_cdisc_dataset_connector.Rd index ad53ae7dd4..e63381429b 100644 --- a/man/rcd_cdisc_dataset_connector.Rd +++ b/man/rcd_cdisc_dataset_connector.Rd @@ -51,7 +51,7 @@ are included to this object as local \code{vars} and they cannot be modified within another dataset.} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Create a \code{CDISCDatasetConnector} from function in \code{random.cdisc.data}. diff --git a/man/rcd_connection.Rd b/man/rcd_connection.Rd index 910355b5f3..1f01fbb0ad 100644 --- a/man/rcd_connection.Rd +++ b/man/rcd_connection.Rd @@ -15,5 +15,5 @@ with \code{random.cdisc.data}.} (\code{DataConnection}) type of object. } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } diff --git a/man/rcd_data.Rd b/man/rcd_data.Rd index 803a2f45b9..1c06ee8e3f 100644 --- a/man/rcd_data.Rd +++ b/man/rcd_data.Rd @@ -18,7 +18,7 @@ In case \code{cached = FALSE}, please watch the order and call \code{ADSL} gener An object of class \code{RelationalDataConnector} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Build data connector for \code{random.cdisc.data} functions or datasets } \details{ diff --git a/man/rcd_dataset_connector.Rd b/man/rcd_dataset_connector.Rd index e62baeaf69..da502f2d8c 100644 --- a/man/rcd_dataset_connector.Rd +++ b/man/rcd_dataset_connector.Rd @@ -47,7 +47,7 @@ are included to this object as local \code{vars} and they cannot be modified within another dataset.} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Create a \code{DatasetConnector} from function in \code{random.cdisc.data}. diff --git a/man/rds_cdisc_dataset_connector.Rd b/man/rds_cdisc_dataset_connector.Rd index 34c95aa3fb..6a2a5e00c5 100644 --- a/man/rds_cdisc_dataset_connector.Rd +++ b/man/rds_cdisc_dataset_connector.Rd @@ -46,7 +46,7 @@ Can't be used simultaneously with \code{script}.} additional arguments applied to \code{\link[base]{readRDS}} function} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Create a \code{CDSICDatasetConnector} from \code{RDS} file with keys automatically diff --git a/man/rds_dataset_connector.Rd b/man/rds_dataset_connector.Rd index 88c03d2b29..9dea17d9e7 100644 --- a/man/rds_dataset_connector.Rd +++ b/man/rds_dataset_connector.Rd @@ -42,7 +42,7 @@ Can't be used simultaneously with \code{script}.} additional arguments applied to \code{\link[base]{readRDS}} function} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Create a \code{DatasetConnector} from \code{RDS} file. diff --git a/man/read_script.Rd b/man/read_script.Rd index 6f8f5796e3..7dbccc66c2 100644 --- a/man/read_script.Rd +++ b/man/read_script.Rd @@ -15,7 +15,7 @@ read_script(file, dataname = NULL) (\code{character}) vector with the code } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} Comments will be excluded } \examples{ diff --git a/man/relational_dataset.Rd b/man/relational_dataset.Rd index 76194f8a5f..0d88fa8b4c 100644 --- a/man/relational_dataset.Rd +++ b/man/relational_dataset.Rd @@ -42,7 +42,7 @@ within another dataset.} \code{\link{Dataset}} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#soft-deprecated}{\figure{lifecycle-soft-deprecated.svg}{options: alt='[Soft-deprecated]'}}}{\strong{[Soft-deprecated]}} +\ifelse{html}{\figure{lifecycle-soft-deprecated.svg}{options: alt='Soft-deprecated lifecycle'}}{\strong{Soft-deprecated}} } \examples{ # Simple example diff --git a/man/relational_dataset_connector.Rd b/man/relational_dataset_connector.Rd index 5815c4cb63..ac5cf44c2f 100644 --- a/man/relational_dataset_connector.Rd +++ b/man/relational_dataset_connector.Rd @@ -51,7 +51,7 @@ within another dataset.} new \code{DatasetConnector} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#soft-deprecated}{\figure{lifecycle-soft-deprecated.svg}{options: alt='[Soft-deprecated]'}}}{\strong{[Soft-deprecated]}} +\ifelse{html}{\figure{lifecycle-soft-deprecated.svg}{options: alt='Soft-deprecated lifecycle'}}{\strong{Soft-deprecated}} } \details{ Create \code{DatasetConnector} from \code{\link{callable_function}}. diff --git a/man/relational_dataset_connector_file.Rd b/man/relational_dataset_connector_file.Rd index fa0a9a9278..44c132aa1c 100644 --- a/man/relational_dataset_connector_file.Rd +++ b/man/relational_dataset_connector_file.Rd @@ -13,7 +13,7 @@ relational_dataset_connector_file(path) \code{DatasetConnector} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#soft-deprecated}{\figure{lifecycle-soft-deprecated.svg}{options: alt='[Soft-deprecated]'}}}{\strong{[Soft-deprecated]}} +\ifelse{html}{\figure{lifecycle-soft-deprecated.svg}{options: alt='Soft-deprecated lifecycle'}}{\strong{Soft-deprecated}} } \details{ Please note that the script has to end with a call creating desired object. The error will diff --git a/man/relational_dataset_file.Rd b/man/relational_dataset_file.Rd index 9a6bda7890..d4ba9a8b46 100644 --- a/man/relational_dataset_file.Rd +++ b/man/relational_dataset_file.Rd @@ -15,7 +15,7 @@ relational_dataset_file(path, code = get_code(path)) \code{Dataset} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#soft-deprecated}{\figure{lifecycle-soft-deprecated.svg}{options: alt='[Soft-deprecated]'}}}{\strong{[Soft-deprecated]}} +\ifelse{html}{\figure{lifecycle-soft-deprecated.svg}{options: alt='Soft-deprecated lifecycle'}}{\strong{Soft-deprecated}} } \examples{ # simple example diff --git a/man/resolve_delayed.Rd b/man/resolve_delayed.Rd index 222427b2f6..1547078755 100644 --- a/man/resolve_delayed.Rd +++ b/man/resolve_delayed.Rd @@ -15,7 +15,7 @@ resolve_delayed(x, datasets) Resolved object. } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} } \examples{ library(random.cdisc.data) diff --git a/man/resolve_delayed_expr.Rd b/man/resolve_delayed_expr.Rd index 9135010b33..1d0e759077 100644 --- a/man/resolve_delayed_expr.Rd +++ b/man/resolve_delayed_expr.Rd @@ -18,7 +18,7 @@ It must take only a single argument "data" and return character vector with colu Character vector - result of calling function \code{x} on dataset \code{ds}. } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} } \examples{ \dontrun{ diff --git a/man/rice_cdisc_dataset_connector.Rd b/man/rice_cdisc_dataset_connector.Rd index d44c065830..0fa7f9358f 100644 --- a/man/rice_cdisc_dataset_connector.Rd +++ b/man/rice_cdisc_dataset_connector.Rd @@ -45,7 +45,7 @@ Can't be used simultaneously with \code{script}.} additional arguments applied to pull function} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Create a \code{CDISCDatasetConnector} from \code{RICE} dataset with keys and parent name assigned diff --git a/man/rice_connection.Rd b/man/rice_connection.Rd index abb74c380c..b02bd72c62 100644 --- a/man/rice_connection.Rd +++ b/man/rice_connection.Rd @@ -22,5 +22,5 @@ will be overwritten with \code{FALSE}.} (\code{DataConnection}) type of object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } diff --git a/man/rice_data.Rd b/man/rice_data.Rd index 707f1a08c4..64a88b06d2 100644 --- a/man/rice_data.Rd +++ b/man/rice_data.Rd @@ -19,7 +19,7 @@ additional user interface to be visible over login panel} An object of class \code{RelatonalDataConnector} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Build data connector for \code{RICE} datasets } \examples{ diff --git a/man/rice_dataset_connector.Rd b/man/rice_dataset_connector.Rd index 65ac26d03c..097a7d9296 100644 --- a/man/rice_dataset_connector.Rd +++ b/man/rice_dataset_connector.Rd @@ -41,7 +41,7 @@ Can't be used simultaneously with \code{script}.} additional arguments applied to pull function} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Create a \code{DatasetConnector} from \code{RICE}. diff --git a/man/root_modules.Rd b/man/root_modules.Rd index 886b01e60d..a35007eda9 100644 --- a/man/root_modules.Rd +++ b/man/root_modules.Rd @@ -10,7 +10,7 @@ root_modules(...) \item{...}{\code{\link{module}} and \code{\link{modules}} object} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} To be used with \code{\link{init}} in the \code{modules} argument. } \details{ diff --git a/man/script_cdisc_dataset_connector.Rd b/man/script_cdisc_dataset_connector.Rd index 8aa65af4d8..23b3fe71ce 100644 --- a/man/script_cdisc_dataset_connector.Rd +++ b/man/script_cdisc_dataset_connector.Rd @@ -51,7 +51,7 @@ are included to this object as local \code{vars} and they cannot be modified within another dataset.} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Create a \code{CDISCDatasetConnector} from \code{script} file with keys assigned diff --git a/man/script_dataset_connector.Rd b/man/script_dataset_connector.Rd index 51262751db..6d19664c7e 100644 --- a/man/script_dataset_connector.Rd +++ b/man/script_dataset_connector.Rd @@ -47,7 +47,7 @@ are included to this object as local \code{vars} and they cannot be modified within another dataset.} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Create a \code{DatasetConnector} from \code{.R} file. diff --git a/man/select_spec.Rd b/man/select_spec.Rd index c8602b3505..11140b10bc 100644 --- a/man/select_spec.Rd +++ b/man/select_spec.Rd @@ -64,7 +64,7 @@ It contains all input values. If \code{select_spec}, then the function double checks the \code{choices} and \code{selected} inputs. } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} \code{select_spec} is used inside teal to create a \code{\link[shiny]{selectInput}} that will select columns from a dataset. } diff --git a/man/set_args.Rd b/man/set_args.Rd index 30ead12658..a9f3a5fd35 100644 --- a/man/set_args.Rd +++ b/man/set_args.Rd @@ -24,7 +24,7 @@ set_args(x, args) nothing } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Set arguments of a \code{CallableFunction} } \examples{ diff --git a/man/set_keys.Rd b/man/set_keys.Rd index fc96768075..9c1424f35e 100644 --- a/man/set_keys.Rd +++ b/man/set_keys.Rd @@ -28,7 +28,7 @@ set_keys(x, ...) (\code{character}) vector of column names } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Set dataset primary keys } \examples{ diff --git a/man/snowflake_cdisc_dataset_connector.Rd b/man/snowflake_cdisc_dataset_connector.Rd index 8bf5ff47b0..851a5e2643 100644 --- a/man/snowflake_cdisc_dataset_connector.Rd +++ b/man/snowflake_cdisc_dataset_connector.Rd @@ -49,7 +49,7 @@ are included to this object as local \code{vars} and they cannot be modified within another dataset.} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Create a \code{CDISCDatasetConnector} from \code{Snowflake} with keys and parent name assigned diff --git a/man/snowflake_connection.Rd b/man/snowflake_connection.Rd index 75c8d3832a..ba95a51967 100644 --- a/man/snowflake_connection.Rd +++ b/man/snowflake_connection.Rd @@ -24,5 +24,5 @@ snowflake_connection( (\code{DataConnection}) type of object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } diff --git a/man/snowflake_data.Rd b/man/snowflake_data.Rd index d661e97352..6a07a84def 100644 --- a/man/snowflake_data.Rd +++ b/man/snowflake_data.Rd @@ -15,7 +15,7 @@ snowflake_data(..., connection) An object of class \code{RelationalDataConnector} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Build data connector for \code{SNOWFLAKE} functions or datasets } \examples{ diff --git a/man/snowflake_dataset_connector.Rd b/man/snowflake_dataset_connector.Rd index 27523bf130..61be1c4c1e 100644 --- a/man/snowflake_dataset_connector.Rd +++ b/man/snowflake_dataset_connector.Rd @@ -45,7 +45,7 @@ are included to this object as local \code{vars} and they cannot be modified within another dataset.} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Create a \code{DatasetConnector} from \code{Snowflake}. diff --git a/man/split_by_sep.Rd b/man/split_by_sep.Rd index f9d35cdf47..4b1a6c1b1f 100644 --- a/man/split_by_sep.Rd +++ b/man/split_by_sep.Rd @@ -12,5 +12,5 @@ split_by_sep(x, sep) \item{sep}{(\code{character}) Separator} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} } diff --git a/man/srv_teal_with_splash.Rd b/man/srv_teal_with_splash.Rd index 8d964306bf..1f2a24807e 100644 --- a/man/srv_teal_with_splash.Rd +++ b/man/srv_teal_with_splash.Rd @@ -48,6 +48,6 @@ Ignored if the app is restored from a bookmarked state. \code{reactive}, return value of \code{\link{srv_teal}} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} Please also refer to the doc of \code{\link{init}}. } diff --git a/man/stop_shiny.Rd b/man/stop_shiny.Rd index df64aa5db5..f6b5593f91 100644 --- a/man/stop_shiny.Rd +++ b/man/stop_shiny.Rd @@ -12,7 +12,7 @@ stop_shiny(title, body) \item{body}{either a string or an object of class \code{shiny.tag}} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} This will start a separate shiny app with a message } \examples{ diff --git a/man/teal_data.Rd b/man/teal_data.Rd index 29c86b1d66..74f1e3f2e6 100644 --- a/man/teal_data.Rd +++ b/man/teal_data.Rd @@ -23,7 +23,7 @@ as provided in arguments. Check is run only if flag is true and preprocessing co (\code{RelationalData}) } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Universal function to pass data to teal application } \examples{ diff --git a/man/teal_data_file.Rd b/man/teal_data_file.Rd index 464741254b..908da4858f 100644 --- a/man/teal_data_file.Rd +++ b/man/teal_data_file.Rd @@ -17,7 +17,7 @@ reproducible code to re-create object} \code{RelationalData} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Please note that the script has to end with a call creating desired object. The error will be raised otherwise. } \examples{ diff --git a/man/teradata_cdisc_dataset_connector.Rd b/man/teradata_cdisc_dataset_connector.Rd index c2e52c7733..d14cd04ea9 100644 --- a/man/teradata_cdisc_dataset_connector.Rd +++ b/man/teradata_cdisc_dataset_connector.Rd @@ -49,7 +49,7 @@ are included to this object as local \code{vars} and they cannot be modified within another dataset.} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Create a \code{CDISCDatasetConnector} from \code{Teradata} with keys and parent name assigned diff --git a/man/teradata_connection.Rd b/man/teradata_connection.Rd index b7e7dde0c5..714e11078d 100644 --- a/man/teradata_connection.Rd +++ b/man/teradata_connection.Rd @@ -25,5 +25,5 @@ argument will be overwritten with \code{ODBC}.} (\code{DataConnection}) type of object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } diff --git a/man/teradata_data.Rd b/man/teradata_data.Rd index 5e59af83c6..340e62b960 100644 --- a/man/teradata_data.Rd +++ b/man/teradata_data.Rd @@ -15,7 +15,7 @@ teradata_data(..., connection = teradata_connection()) An object of class \code{RelationalDataConnector} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} Build data connector for \code{TERADATA} functions or datasets } \examples{ diff --git a/man/teradata_dataset_connector.Rd b/man/teradata_dataset_connector.Rd index ade8ec154f..77c407500b 100644 --- a/man/teradata_dataset_connector.Rd +++ b/man/teradata_dataset_connector.Rd @@ -45,7 +45,7 @@ are included to this object as local \code{vars} and they cannot be modified within another dataset.} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#experimental}{\figure{lifecycle-experimental.svg}{options: alt='[Experimental]'}}}{\strong{[Experimental]}} +\ifelse{html}{\out{Experimental lifecycle}}{\strong{Experimental}} } \details{ Create a \code{DatasetConnector} from \code{Teradata}. diff --git a/man/ui_teal_with_splash.Rd b/man/ui_teal_with_splash.Rd index 669d800c8e..46a75bc027 100644 --- a/man/ui_teal_with_splash.Rd +++ b/man/ui_teal_with_splash.Rd @@ -26,7 +26,7 @@ object containing data} \item{footer}{(\code{character} or \code{shiny.tag}) the footer of the app} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} The splash screen could be used to query for a password to fetch the data. \code{\link{init}} is a very thin wrapper around this module useful for end-users which assumes that it is a top-level module and cannot be embedded. diff --git a/man/updateOptionalSelectInput.Rd b/man/updateOptionalSelectInput.Rd index edea67d1ba..2d7a05f041 100644 --- a/man/updateOptionalSelectInput.Rd +++ b/man/updateOptionalSelectInput.Rd @@ -29,5 +29,5 @@ then that name rather than the value is displayed to the user.} \code{NULL} } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} } diff --git a/man/value_choices.Rd b/man/value_choices.Rd index f2d8322115..5c16691c7d 100644 --- a/man/value_choices.Rd +++ b/man/value_choices.Rd @@ -40,7 +40,7 @@ See examples for more details.} named character vector or \code{delayed_data} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} } \examples{ library(random.cdisc.data) diff --git a/man/variable_choices.Rd b/man/variable_choices.Rd index 608b78dc2d..70d37baaf5 100644 --- a/man/variable_choices.Rd +++ b/man/variable_choices.Rd @@ -42,7 +42,7 @@ associated with the primary key and display the appropriate icon for them in the named character vector with additional attributes or \code{delayed_data} object } \description{ -\ifelse{html}{\href{https://lifecycle.r-lib.org/articles/stages.html#maturing}{\figure{lifecycle-maturing.svg}{options: alt='[Maturing]'}}}{\strong{[Maturing]}} +\ifelse{html}{\out{Maturing lifecycle}}{\strong{Maturing}} } \examples{ library(random.cdisc.data)