diff --git a/RNA-seq/renv.lock b/RNA-seq/renv.lock
index b012253b..f6815553 100644
--- a/RNA-seq/renv.lock
+++ b/RNA-seq/renv.lock
@@ -961,16 +961,16 @@
     },
     "callr": {
       "Package": "callr",
-      "Version": "3.7.5",
+      "Version": "3.7.6",
       "Source": "Repository",
-      "Repository": "CRAN",
+      "Repository": "BioC.CRAN",
       "Requirements": [
         "R",
         "R6",
         "processx",
         "utils"
       ],
-      "Hash": "9f0e4fae4963ba775a5e5c520838c87b"
+      "Hash": "d7e13f49c19103ece9e58ad2d83a7354"
     },
     "car": {
       "Package": "car",
@@ -1794,20 +1794,19 @@
     },
     "htmltools": {
       "Package": "htmltools",
-      "Version": "0.5.7",
+      "Version": "0.5.8",
       "Source": "Repository",
-      "Repository": "RSPM",
+      "Repository": "BioC.CRAN",
       "Requirements": [
         "R",
         "base64enc",
         "digest",
-        "ellipsis",
         "fastmap",
         "grDevices",
         "rlang",
         "utils"
       ],
-      "Hash": "2d7b3857980e0e0d0a1fd6f11928ab0f"
+      "Hash": "149431ee39aba5bdc264112c8ff94444"
     },
     "htmlwidgets": {
       "Package": "htmlwidgets",
@@ -3013,14 +3012,14 @@
     },
     "teal.logger": {
       "Package": "teal.logger",
-      "Version": "0.1.3.9013",
+      "Version": "0.2.0.9001",
       "Source": "GitHub",
       "RemoteType": "github",
       "RemoteHost": "api.github.com",
       "RemoteUsername": "insightsengineering",
       "RemoteRepo": "teal.logger",
       "RemoteRef": "main",
-      "RemoteSha": "723a974d47b7aa7af309d37fb1c09963da797be5",
+      "RemoteSha": "d44e533c59efb1b52069dda737d8d3dd934cf9d2",
       "Requirements": [
         "R",
         "glue",
@@ -3030,7 +3029,7 @@
         "shiny",
         "withr"
       ],
-      "Hash": "0326135e936b8ade706dcb1d9b6b3089"
+      "Hash": "4c64e95b353669fd6c338db01cdc6215"
     },
     "teal.modules.general": {
       "Package": "teal.modules.general",
@@ -3072,14 +3071,14 @@
     },
     "teal.modules.hermes": {
       "Package": "teal.modules.hermes",
-      "Version": "0.1.6.9007",
+      "Version": "0.1.6.9008",
       "Source": "GitHub",
       "RemoteType": "github",
       "RemoteHost": "api.github.com",
       "RemoteUsername": "insightsengineering",
       "RemoteRepo": "teal.modules.hermes",
       "RemoteRef": "main",
-      "RemoteSha": "3c89b027745602d693b8cdaae0dec10a825f9e63",
+      "RemoteSha": "4c1d9726219c92f0238e1b6047d2fd57e674564d",
       "Requirements": [
         "DT",
         "MultiAssayExperiment",
@@ -3105,7 +3104,7 @@
         "teal.widgets",
         "tern"
       ],
-      "Hash": "f51722d9eb546c227b44e7cbf76883dd"
+      "Hash": "87f253073c7446aef99fcbf6f8735232"
     },
     "teal.reporter": {
       "Package": "teal.reporter",
@@ -3450,15 +3449,15 @@
     },
     "xfun": {
       "Package": "xfun",
-      "Version": "0.42",
+      "Version": "0.43",
       "Source": "Repository",
-      "Repository": "RSPM",
+      "Repository": "BioC.CRAN",
       "Requirements": [
         "grDevices",
         "stats",
         "tools"
       ],
-      "Hash": "fd1349170df31f7a10bd98b0189e85af"
+      "Hash": "ab6371d8653ce5f2f9290f4ec7b42a8e"
     },
     "xml2": {
       "Package": "xml2",