diff --git a/RNA-seq/renv.lock b/RNA-seq/renv.lock
index 8715cc54..e09b19ac 100644
--- a/RNA-seq/renv.lock
+++ b/RNA-seq/renv.lock
@@ -505,16 +505,16 @@
     },
     "R.oo": {
       "Package": "R.oo",
-      "Version": "1.25.0",
+      "Version": "1.26.0",
       "Source": "Repository",
-      "Repository": "CRAN",
+      "Repository": "RSPM",
       "Requirements": [
         "R",
         "R.methodsS3",
         "methods",
         "utils"
       ],
-      "Hash": "a0900a114f4f0194cf4aa8cd4a700681"
+      "Hash": "4fed809e53ddb5407b3da3d0f572e591"
     },
     "R.utils": {
       "Package": "R.utils",
@@ -565,7 +565,7 @@
     },
     "RSQLite": {
       "Package": "RSQLite",
-      "Version": "2.3.4",
+      "Version": "2.3.5",
       "Source": "Repository",
       "Repository": "RSPM",
       "Requirements": [
@@ -580,7 +580,7 @@
         "plogr",
         "rlang"
       ],
-      "Hash": "4bf2af2d714d0ee2b4fec0e6b8c150e6"
+      "Hash": "f5a75d57e0a3014a6ef537ac04a80fc6"
     },
     "Rcpp": {
       "Package": "Rcpp",
@@ -704,7 +704,7 @@
     },
     "XML": {
       "Package": "XML",
-      "Version": "3.99-0.16",
+      "Version": "3.99-0.16.1",
       "Source": "Repository",
       "Repository": "RSPM",
       "Requirements": [
@@ -712,7 +712,7 @@
         "methods",
         "utils"
       ],
-      "Hash": "131e2febe15d5bbca3a37bd69e71b873"
+      "Hash": "da3098169c887914551b607c66fe2a28"
     },
     "XVector": {
       "Package": "XVector",
@@ -1081,9 +1081,9 @@
     },
     "cowplot": {
       "Package": "cowplot",
-      "Version": "1.1.2",
+      "Version": "1.1.3",
       "Source": "Repository",
-      "Repository": "CRAN",
+      "Repository": "RSPM",
       "Requirements": [
         "R",
         "ggplot2",
@@ -1094,7 +1094,7 @@
         "rlang",
         "scales"
       ],
-      "Hash": "ef28211987921217c61b4f4068068dac"
+      "Hash": "8ef2084dd7d28847b374e55440e4f8cb"
     },
     "cpp11": {
       "Package": "cpp11",
@@ -1285,7 +1285,7 @@
     },
     "emmeans": {
       "Package": "emmeans",
-      "Version": "1.9.0",
+      "Version": "1.10.0",
       "Source": "Repository",
       "Repository": "RSPM",
       "Requirements": [
@@ -1298,7 +1298,7 @@
         "stats",
         "utils"
       ],
-      "Hash": "2960b19684148775d90817224324afd3"
+      "Hash": "fa6dcc3b50ce8c6ad148786ea82fccbe"
     },
     "estimability": {
       "Package": "estimability",
@@ -1696,9 +1696,9 @@
     },
     "httpuv": {
       "Package": "httpuv",
-      "Version": "1.6.13",
+      "Version": "1.6.14",
       "Source": "Repository",
-      "Repository": "RSPM",
+      "Repository": "CRAN",
       "Requirements": [
         "R",
         "R6",
@@ -1707,7 +1707,7 @@
         "promises",
         "utils"
       ],
-      "Hash": "d23d2879001f3d82ee9dc38a9ef53c4c"
+      "Hash": "16abeb167dbf511f8cc0552efaf05bab"
     },
     "httr": {
       "Package": "httr",
@@ -3144,9 +3144,9 @@
     },
     "tidyr": {
       "Package": "tidyr",
-      "Version": "1.3.0",
+      "Version": "1.3.1",
       "Source": "Repository",
-      "Repository": "CRAN",
+      "Repository": "RSPM",
       "Requirements": [
         "R",
         "cli",
@@ -3163,7 +3163,7 @@
         "utils",
         "vctrs"
       ],
-      "Hash": "e47debdc7ce599b070c8e78e8ac0cfcf"
+      "Hash": "915fb7ce036c22a6a33b5a8adb712eb1"
     },
     "tidyselect": {
       "Package": "tidyselect",