From b069bc575398927c21c80f9380eaa1b9086d06a1 Mon Sep 17 00:00:00 2001 From: cmaumet Date: Tue, 1 Aug 2017 14:30:28 +0100 Subject: [PATCH 1/2] fix definitions of "coordinate vector" and "coord vector in voxels" --- nidm/nidm-results/terms/nidm-results.owl | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/nidm/nidm-results/terms/nidm-results.owl b/nidm/nidm-results/terms/nidm-results.owl index 955628678..b684569bc 100644 --- a/nidm/nidm-results/terms/nidm-results.owl +++ b/nidm/nidm-results/terms/nidm-results.owl @@ -576,7 +576,7 @@ nidm:NIDM_0000086 rdf:type owl:DatatypeProperty ; obo:IAO_0000112 "[-60, 32, 54]"^^xsd:string ; - obo:IAO_0000115 "A vector with one number per dimension. The first element corresponds to the 'Coordinate' along the first dimension measured in map elements (e.g., pixels, voxels, vertices, or faces), the second element to the 'Coordinate' along the second dimension etc." ; + obo:IAO_0000115 "A vector with one number per dimension. The first element corresponds to the 'Coordinate' along the first dimension measured in world units (e.g. 'mm'), the second element to the 'Coordinate' along the second dimension etc." ; obo:IAO_0000116 "Under discussion at: https://github.com/incf-nidash/nidm/pull/270 and https://github.com/incf-nidash/nidm/issues/145" ; @@ -1233,7 +1233,7 @@ nidm:NIDM_0000139 rdf:type owl:DatatypeProperty ; rdfs:label "coordinate Vector In Voxels" ; - obo:IAO_0000115 "Coordinate along the first dimension in voxels. (This definition needs to be re-worked as this term was renamed from coordinate1 to coordinate in https://github.com/incf-nidash/nidm/issues/270)" ; + obo:IAO_0000115 "A vector with one number per dimension. The first element corresponds to the 'Coordinate' along the first dimension measured in map elements (e.g., pixels, voxels, vertices, or faces), the second element to the 'Coordinate' along the second dimension etc." ; obo:IAO_0000112 "[12 51 48]" ; From 552dc9546cc42bbbfabc06e265df03302962b714 Mon Sep 17 00:00:00 2001 From: cmaumet Date: Tue, 1 Aug 2017 14:31:19 +0100 Subject: [PATCH 2/2] python scripts/refresh.py --- doc/content/specs/nidm-results_dev.html | 4 ++-- nidm/nidm-results/terms/README.md | 4 ++-- 2 files changed, 4 insertions(+), 4 deletions(-) diff --git a/doc/content/specs/nidm-results_dev.html b/doc/content/specs/nidm-results_dev.html index 156b233f5..10241710d 100644 --- a/doc/content/specs/nidm-results_dev.html +++ b/doc/content/specs/nidm-results_dev.html @@ -2188,8 +2188,8 @@

nidm:'Coordinate'

A nidm:'Coordinate' has attributes:
diff --git a/nidm/nidm-results/terms/README.md b/nidm/nidm-results/terms/README.md index c23db6454..b1266b1fe 100644 --- a/nidm/nidm-results/terms/README.md +++ b/nidm/nidm-results/terms/README.md @@ -100,7 +100,7 @@ Thank you in advance for taking part in NIDM-Results term curation! Under discussion at: #270 and #145
[more] - nidm:'coordinate Vector': A vector with one number per dimension. The first element corresponds to the 'Coordinate' along the first dimension measured in map elements (e.g., pixels, voxels, vertices, or faces), the second element to the 'Coordinate' along the second dimension etc + nidm:'coordinate Vector': A vector with one number per dimension. The first element corresponds to the 'Coordinate' along the first dimension measured in world units (e.g. 'mm'), the second element to the 'Coordinate' along the second dimension etc nidm:NIDM_0000015 xsd:string @@ -219,7 +219,7 @@ Thank you in advance for taking part in NIDM-Results term curation! Under discussion at: #270
[more] - nidm:'coordinate Vector In Voxels': Coordinate along the first dimension in voxels. (This definition needs to be re-worked as this term was renamed from coordinate1 to coordinate in https://github.com/incf-nidash/nidm/issues/270) + nidm:'coordinate Vector In Voxels': A vector with one number per dimension. The first element corresponds to the 'Coordinate' along the first dimension measured in map elements (e.g., pixels, voxels, vertices, or faces), the second element to the 'Coordinate' along the second dimension etc nidm:NIDM_0000015 xsd:string