Update from upstream

.datalad/.gitattributes

@@ -0,0 +1,4 @@
+
+config annex.largefiles=nothing
+metadata/aggregate* annex.largefiles=nothing
+metadata/objects/** annex.largefiles=(anything)

.datalad/config

@@ -0,0 +1,2 @@
+[datalad "dataset"]
+	id = 2b3f09cc-05d0-4364-a694-73e1af4079e6

.env.tpl

@@ -0,0 +1,3 @@
+export PUPIL_PATH=../pupil
+#export PUPIL_PATH=/home/basile/data/src/pupil
+export GI_TYPELIB_PATH=/usr/local/lib/x86_64-linux-gnu/girepository-1.0/

.gitattributes

@@ -0,0 +1,9 @@
+* annex.backend=MD5E
+**/.git* annex.largefiles=nothing
+*.jpg annex.largefiles=anything
+*.png annex.largefiles=anything
+*.svg annex.largefiles=anything
+*.txt annex.largefiles=nothing
+*.tsv annex.largefiles=nothing
+*.csv annex.largefiles=nothing
+*.py annex.largefiles=nothing

.gitignore

@@ -102,3 +102,4 @@ venv.bak/
 
 # mypy
 .mypy_cache/
+data/things/memory_designs/*

.gitmodules

@@ -0,0 +1,12 @@
+[submodule "data/things/images"]
+	path = data/things/images
+	url = [email protected]:courtois-neuromod/things.stimuli.git
+	datalad-id = 5504289b-0ac5-4f7c-a6cd-86af1f5c2135
+[submodule "data/videogames/shinobi"]
+	path = data/videogames/shinobi
+	url = [email protected]:courtois-neuromod/shinobi.stimuli.git
+	datalad-id = 74cb8a6e-664b-11eb-a4f2-1a44c1d5432b
+[submodule "data/videogames/mario"]
+	path = data/videogames/mario
+	url = [email protected]:courtois-neuromod/mario.stimuli.git
+	datalad-id = 23782599-795f-46e5-aefe-5ecd578e968d

README.md

@@ -47,11 +47,13 @@ mkdir output
 
 ## how to launch a session
 
-`python3 main.py --subject test --ses videoshorttest --eyetracking --fmri`
+`python3 main.py --subject test --session video003 --tasks videoshorttest --eyetracking --fmri -o /path/to/dataset/`
 
 - --subject: can be whatever, will be used to save data in a bids-like structure
-- --session: must match the name of a session script in `src/ses-<session_name>.py`, which contains the tasks to be ran on that session
+- --session: a session identifier that will be used to save the data in the BIDS
+- --tasks: must match the name of a session script in `src/ses-<session_name>.py`, which contains the tasks to be ran on that session
 - --eyetracking: turn on eyetracking, start pupil software and recording of eye
+- -o : specifies the path to the root of the dataset where to output the data (in sourcedata or BIDS )
 
 - --fmri: will wait for TTL (can be emulated with character `5` on the keyboard) to start the tasks that are labeled as fmri dependent. When not using that flag, tasks will run back to back. It will also append a video loop at the beginning of the session in order for the participant to have sound and visual stimuli to test the setup (then skip to start the session).