Update_htool #93
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # This is a basic workflow to help you get started with Actions | |
| name: CI | |
| # Controls when the action will run. | |
| on: | |
| # Triggers the workflow on push or pull request events but only for the master branch | |
| push: | |
| branches: [main] | |
| pull_request: | |
| branches: [main] | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| # # Run tests every month | |
| # schedule: | |
| # - cron: '0 0 1 * *' | |
| # A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
| jobs: | |
| # This workflow contains a single job called "build" | |
| linux: | |
| # The type of runner that the job will run on | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| include: | |
| - name: "Ubuntu OpenMPI g++" | |
| CC_COMPILER: gcc | |
| CXX_COMPILER: g++ | |
| container: "ubuntu_gcc_openmpi" | |
| MPIEXEC_PREFLAGS: "--allow-run-as-root --oversubscribe" | |
| USE_SANITIZER: "" | |
| CMAKE_BUILD_TYPE: Release | |
| DOCKER_OPTIONS: "--cap-add SYS_PTRACE" | |
| CODE_COVERAGE: "OFF" | |
| - name: "Ubuntu OpenMPI clang++" | |
| CC_COMPILER: clang | |
| CXX_COMPILER: clang++ | |
| container: "ubuntu_clang_openmpi" | |
| MPIEXEC_PREFLAGS: "--allow-run-as-root --oversubscribe" | |
| USE_SANITIZER: "" | |
| CMAKE_BUILD_TYPE: Release | |
| DOCKER_OPTIONS: "--cap-add SYS_PTRACE" | |
| CODE_COVERAGE: "OFF" | |
| - name: "Ubuntu MPICH g++" | |
| CC_COMPILER: gcc | |
| CXX_COMPILER: g++ | |
| container: "ubuntu_gcc_mpich" | |
| MPIEXEC_PREFLAGS: "" | |
| CMAKE_BUILD_TYPE: Debug | |
| DOCKER_OPTIONS: " " | |
| CODE_COVERAGE: "ON" | |
| - name: "Ubuntu MPICH clang++" | |
| CC_COMPILER: clang | |
| CXX_COMPILER: clang++ | |
| container: "ubuntu_clang_mpich" | |
| MPIEXEC_PREFLAGS: "" | |
| CMAKE_BUILD_TYPE: Release | |
| DOCKER_OPTIONS: " " | |
| CODE_COVERAGE: "OFF" | |
| # Hangs on github | |
| - name: "Debian OpenMPI g++" | |
| CC_COMPILER: gcc | |
| CXX_COMPILER: g++ | |
| container: "debian_gcc_openmpi" | |
| MPIEXEC_PREFLAGS: "--allow-run-as-root --oversubscribe" | |
| USE_SANITIZER: "" | |
| CMAKE_BUILD_TYPE: Release | |
| DOCKER_OPTIONS: "--cap-add SYS_PTRACE" | |
| CODE_COVERAGE: "OFF" | |
| - name: "Debian OpenMPI clang++" | |
| CC_COMPILER: clang | |
| CXX_COMPILER: clang++ | |
| container: "debian_clang_openmpi" | |
| MPIEXEC_PREFLAGS: "--allow-run-as-root --oversubscribe" | |
| USE_SANITIZER: "" | |
| CMAKE_BUILD_TYPE: Release | |
| DOCKER_OPTIONS: "--cap-add SYS_PTRACE" | |
| CODE_COVERAGE: "OFF" | |
| - name: "Debian MPICH g++" | |
| CC_COMPILER: gcc | |
| CXX_COMPILER: g++ | |
| container: "debian_gcc_mpich" | |
| MPIEXEC_PREFLAGS: "" | |
| CMAKE_BUILD_TYPE: Release | |
| DOCKER_OPTIONS: " " | |
| CODE_COVERAGE: "OFF" | |
| - name: "Debian MPICH clang++" | |
| CC_COMPILER: clang | |
| CXX_COMPILER: clang++ | |
| container: "debian_clang_mpich" | |
| MPIEXEC_PREFLAGS: "" | |
| CMAKE_BUILD_TYPE: Release | |
| DOCKER_OPTIONS: " " | |
| CODE_COVERAGE: "OFF" | |
| container: | |
| image: pierremarchand/htool_testing_environments:${{ matrix.container }} | |
| options: --user root ${{ matrix.DOCKER_OPTIONS }} | |
| name: CI (${{ matrix.name }}) | |
| env: | |
| CC: ${{ matrix.CC_COMPILER }} | |
| CXX: ${{ matrix.CXX_COMPILER }} | |
| # Steps represent a sequence of tasks that will be executed as part of the job | |
| if: "!contains(github.event.head_commit.message, '[ci skip]')" | |
| steps: | |
| - name: Checkout htool-python | |
| uses: actions/checkout@v3 | |
| with: | |
| submodules: "true" | |
| - name: Activate virtualenv | |
| run: | | |
| . /usr/local/share/venv/bin/activate | |
| echo PATH=$PATH >> $GITHUB_ENV | |
| - name: Build package in release | |
| if: matrix.CODE_COVERAGE == 'OFF' | |
| run: | | |
| python3 -m pip install .[dev] | |
| - name: Build package in debug for coverage | |
| if: matrix.CODE_COVERAGE == 'ON' | |
| run: | | |
| mkdir build && cd build | |
| python3 -m pip install numpy matplotlib ruff pytest mpi4py scipy | |
| CC=${{ matrix.CC_COMPILER }} CXX=${{ matrix.CXX_COMPILER }} cmake -DUSE_SANITIZER=${{ matrix.USE_SANITIZER }} -DCMAKE_BUILD_TYPE=${{ matrix.CMAKE_BUILD_TYPE }} -DCODE_COVERAGE=${{ matrix.CODE_COVERAGE }} ../ | |
| make | |
| - name: Run tests | |
| run: | | |
| export PYTHONPATH="$PWD/build" | |
| mpirun -np 1 ${{ matrix.MPIEXEC_PREFLAGS }} python3 -m pytest tests | |
| mpirun -np 2 ${{ matrix.MPIEXEC_PREFLAGS }} python3 -m pytest tests | |
| mpirun -np 3 ${{ matrix.MPIEXEC_PREFLAGS }} python3 -m pytest tests | |
| mpirun -np 4 ${{ matrix.MPIEXEC_PREFLAGS }} python3 -m pytest tests | |
| - name: Check format | |
| if: matrix.CODE_COVERAGE == 'ON' | |
| # https://github.com/actions/checkout/pull/762 | |
| run: | | |
| git config --global --add safe.directory `pwd` | |
| cd build | |
| make format | |
| make cmake-format | |
| git diff --exit-code | |
| - name: Check with ruff | |
| run: | | |
| ruff check example/ tests/ | |
| - name: Generate coverage reports | |
| if: matrix.CODE_COVERAGE == 'ON' | |
| run: | | |
| lcov --ignore-errors mismatch --capture --base-directory ./ --directory build/ --output-file coverage.info | |
| lcov --remove coverage.info '/usr/*' '*/hpddm/*' '*/pybind11/*' '*/lib/htool/*' --output-file ../coverage.info | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| path: coverage.info | |
| if-no-files-found: error | |
| if: matrix.CODE_COVERAGE == 'ON' | |
| coverage: | |
| runs-on: ubuntu-latest | |
| if: ${{ success() }} | |
| needs: [ linux ] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - uses: actions/download-artifact@v4 | |
| - name: Upload coverage report | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| fail_ci_if_error: true | |
| file: ./coverage.info | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| verbose: true |