Skip to content

Latest commit

 

History

History

lineageflow-triangulations

This program is used for the creation and manipulation of triangulations and sets of contacts between cells.

It also includes the lf-triangulations executable, containing the following subcommands:

  • delaunay: calculation of the Delaunay tesselation of points;
  • neighbors: extraction of contacts from tesselation;
  • distance: calculation of distance between contacts;
  • filter-smaller: filtering of contacts using an upper bound;
  • filter-larger: filtering of contacts using a lower bound;
  • expand: expansion of neighborhood graphs;
  • full-graph: generation of the full graph of cells;
  • global-neighbors: calculation of global neighbors from local ones;
  • global-neighbors-genealogy: calculation of global neighbors from local ones, including lineage;
  • merge: merge triangulations;
  • neighborhood-radius: calculation of neighborhood radius;
  • neighborhood-proportional-radius: calculation of neighborhood radius, weighted by global values.