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<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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<title>Gunnar Schaefer</title>
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<h1>Gunnar Schaefer</h1>
<ul>
<li>Software Engineering Lead</li>
<li><a href="http://post.stanford.edu/">Project on Scientific Transparency</a></li>
</ul>
</div>
<!--
<div id="page_title_rightcontent">
<ul>
<li><a href="http://cni.stanford.edu/">Center for Cognitive and Neurobiological Imaging</a></li>
<li><a href="http://stanford.edu/">Stanford University</a></li>
</ul>
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<div id="content">
<img src="images/gunnar.png" onmouseover="this.src='images/gunnar_ir.png'" onmouseout="this.src='images/gunnar.png'" alt="Gunnar Schaefer" border="0" style="float:left; padding:1em 2em 0em 0em;" />
<h2>Mission Statement</h2>
<p>I thrive on applying my computer engineering know-how to facilitate and accelerate scientific research. In particular, I enjoy using my skills in Python programming, web technologies, systems administration, and enterprise-class data storage to enable scientific data management and high performance computing.</p>
<p style="clear: left;"></p><br />
<h2>Specialties</h2>
<ul>
<li>Scientific Data Management</li>
<li>Enterprise-class Data Storage</li>
<li>High Performance Computing</li>
</ul>
<h2>Enablers</h2>
<ul>
<li>Python, Bash, C, Objective-C</li>
<li>JSON, MongoDB, REST, AngularJS</li>
<li>Vim, Git, SCons, LaTeX</li>
<li>FreeBSD, Ubuntu, OS X</li>
<li>ZFS</li>
</ul>
<h2>Disablers</h2>
<ul>
<li>Microsoft</li>
<li>Java</li>
<li>Flash</li>
<li>XML</li>
<li>Emacs</li>
</ul>
<h2>Short Bio</h2>
<dl>
<dt>since July 2013</dt>
<dd>Software Engineering Lead, <a href="http://post.stanford.edu/">Project on Scientific Transparency</a>, <a href="http://stanford.edu/">Stanford University</a>, CA.</dd>
<dt>November 2010 to June 2013</dt>
<dd>Senior Systems Engineer at <a href="http://cni.stanford.edu/">Center for Cognitive and Neurobiological Imaging</a>, <a href="http://stanford.edu/">Stanford University</a>, CA.</dd>
<dt>September 2010 to February 2011</dt>
<dd>Consulting Lab Manager at <a href="http://spl.stanford.edu/">Stanford Psychophysiology Laboratory</a>, <a href="http://stanford.edu/">Stanford University</a>, CA.</dd>
<dt>September 2006 to August 2009</dt>
<dd>Graduate Research Assistant at <a href="http://lcav.epfl.ch/">Audiovisual Communications Laboratory</a>, <a href="http://epfl.ch/">Ecole Polytechnique Fédérale de Lausanne (EPFL)</a>, Switzerland.</dd>
<dt>June 2006</dt>
<dd>Master's Degree in Computer Engineering (<i>Diplom-Ingenieur</i>) from <a href="http://www.uni-kiel.de/">Christian-Albrechts-Universität zu Kiel</a>, Germany.</dd>
<dt>April to December 2005</dt>
<dd>Research Internship at <a href="http://www.mercedes-benz.co.in/">Mercedes-Benz Research & Development India</a>, Bangalore, India.</dd>
<dt>March to August 2003</dt>
<dd>Research Internship at <a href="http://mbrdna.com/">Mercedes-Benz Research & Development North America</a>, Palo Alto, CA.</dd>
</dl>
<p></p><br />
<h2>Publications</h2>
<ul>
<li>Gorgolewski, K. J. et al. <a href="https://www.nature.com/articles/sdata201644" target="_blank">The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments</a>, Scientific Data, 3:160044, 2016.</li>
<li>B. A. Wandell, A. Rokem, L. M. Perry, <b>G. Schaefer</b>, and R. F. Dougherty, <a href="https://arxiv.org/abs/1502.06900" target="_blank">Data Management to Support Reproducible Research</a>, <i>ARXIV, Quantitative Biology–Quantitative Methods</i>, 2015arXiv150206900W, 2015.</li>
<li>S. D. Kreibig, <b>G. Schaefer</b>, and T. Brosch, Psychophysiological response patterning in emotion: Implications for affective computing. In K. R. Scherer, T. Baenziger, and E. Roesch, editors, <i>Blueprint for affective computing: A sourcebook</i>, pages 105–130. Oxford University Press, Oxford, UK, 2010.</li>
<li>F. Ingelrest, G. Barrenetxea, <b>G. Schaefer</b>, M. Vetterli, O. Couach, and M. Parlange, <a href="pdf/tosn2010.pdf" target="_blank">SensorScope: Application-Specific Sensor Network for Environmental Monitoring</a>, <i>ACM Transactions on Sensor Networks</i>, Vol. 6, Nr. 2, pp. 1–32, 2010.</li>
<li><b>G. Schaefer</b>, F. Ingelrest, and M. Vetterli, <a href="pdf/ewsn2009.pdf" target="_blank">Potentials of Opportunistic Routing in Energy-Constrained Wireless Sensor Networks</a>, <i>The 6th European Conference on Wireless Sensor Networks (EWSN 2009)</i>, pp. 118–133, 2009.</li>
<li>G. Barrenetxea, F. Ingelrest, <b>G. Schaefer</b>, and M. Vetterli, <a href="pdf/sensys2008.pdf" target="_blank">The Hitchhiker's Guide to Successful Wireless Sensor Network Deployments</a>, <i>The 6th ACM Conference on Embedded Networked Sensor Systems (SenSys 2008)</i>, pp. 43–56, 2008.</li>
<li>G. Barrenetxea, F. Ingelrest, <b>G. Schaefer</b>, M. Vetterli, O. Couach, and M. Parlange, <a href="pdf/ipsn2008.pdf" target="_blank">SensorScope: Out-of-the-Box Environmental Monitoring</a>, <i>The 7th ACM/IEEE International Conference on Information Processing in Sensor Networks (IPSN 2008)</i>, pp. 332–343, 2008.</li>
<li>G. Barrenetxea, F. Ingelrest, <b>G. Schaefer</b> and M. Vetterli, <a href="pdf/izs2008.pdf" target="_blank">Wireless Sensor Networks for Environmental Monitoring: The SensorScope Experience</a>, <i>The 20th IEEE International Zurich Seminar on Communications (IZS 2008)</i>, 2008.</li>
<li>S. Prochnow, <b>G. Schaefer</b>, K. Bell, and R. von Hanxleden, <a href="pdf/martes2006.pdf" target="_blank">Analyzing Robustness of UML State Machines</a>, <i>The 9th ACM/IEEE International Conference on Model Driven Engineering Languages and Systems (MoDELS 2006)</i>, pp. 61–80, 2006.</li>
</ul>
</div>
<div id="sidebar">
<h3>Email</h3>
<p><img src="images/gsfr_email.png" alt="" height="13pt" border="0" style="float:left; padding-top:0em; padding-right:0em; margin-left:0em; margin-bottom:0em" /> </p>
<h3>Phone</h3>
<p>650 724 5432</p>
<h3>Office</h3>
<p>Jordan Hall, Room 489</p>
<h3>Address</h3>
<p>450 Serra Mall, Bldg 420</p>
<p>Stanford, CA 94305</p>
<br/>
<h3>Web Presence</h3>
<p><a href="http://www.linkedin.com/in/gunnarschaefer">LinkedIn</a></p>
<p><a href="https://github.com/gsfr">GitHub</a></p>
<br/>
<h3>Resources</h3>
<p><a href="vimrc.html">My vimrc</a></p>
<p><a href="profile.html">My bash profile</a></p>
</div>
<div id="footer">
<ul>
<li>© 2012 Gunnar Schaefer.</li>
<li>All rights reserved.</li>
</ul>
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