From b953a5eeddf82b914951e27d694f2e963c8af049 Mon Sep 17 00:00:00 2001 From: Susanna Kiwala Date: Wed, 14 Dec 2016 09:13:39 -0600 Subject: [PATCH] Update version to 4.0.5 --- docs/conf.py | 4 ++-- docs/index.rst | 2 +- setup.py | 2 +- 3 files changed, 4 insertions(+), 4 deletions(-) diff --git a/docs/conf.py b/docs/conf.py index 52b0e04..c7963a0 100644 --- a/docs/conf.py +++ b/docs/conf.py @@ -62,9 +62,9 @@ # built documents. # # The short X.Y version. -version = '4.0.4' +version = '4.0.5' # The full version, including alpha/beta/rc tags. -release = '4.0.4' +release = '4.0.5' # The language for content autogenerated by Sphinx. Refer to documentation # for a list of supported languages. diff --git a/docs/index.rst b/docs/index.rst index ea0cbaf..6fdd7aa 100644 --- a/docs/index.rst +++ b/docs/index.rst @@ -23,7 +23,7 @@ pVAC-Seq is a cancer immunotherapy pipeline for the identification of **p**\ ers New in version |version| ------------------------ -This release fixes a couple of minor bugs. Firstly, the pipeline will now skip variants that result in the loss of a start codon. Secondly, this release fixes a bug that would result in an error when the input VCF doesn't contain any sample genotype information. VCFs with no samples will now be fully processed through the pipeline. +This release fixes a couple of bugs related to the processing of frameshift variants. Citation -------- diff --git a/setup.py b/setup.py index c246fe4..c9ea4b3 100644 --- a/setup.py +++ b/setup.py @@ -29,7 +29,7 @@ setup( name="pvacseq", - version="4.0.4", + version="4.0.5", packages=["pvacseq", "pvacseq.lib", "pvacseq.server"], entry_points={ "console_scripts":[