From 7c45cbfc195d5874a9297bec395e2a6af94109ef Mon Sep 17 00:00:00 2001 From: Susanna Kiwala Date: Wed, 21 Dec 2016 10:09:41 -0600 Subject: [PATCH] Fix typo --- pvacseq/lib/pipeline.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pvacseq/lib/pipeline.py b/pvacseq/lib/pipeline.py index 0f9ede1..48c01ca 100644 --- a/pvacseq/lib/pipeline.py +++ b/pvacseq/lib/pipeline.py @@ -328,7 +328,7 @@ def execute(self): if self.input_file_type == 'vcf': sys.exit("The TSV file is empty. Please check that the input VCF contains missense, inframe indel, or frameshift mutations.") elif self.input_file_type == 'bedpe': - sys.exit("The TSV file is empty. Please check tha the input bedpe file contains fusion entries.") + sys.exit("The TSV file is empty. Please check that the input bedpe file contains fusion entries.") chunks = self.split_tsv_file(total_row_count) self.generate_fasta(chunks)