From a199aad58f438009cddf94d32aa37c0b3264de45 Mon Sep 17 00:00:00 2001 From: Erik Sverdrup Date: Mon, 4 Nov 2024 03:49:51 +1100 Subject: [PATCH] Add gh pages (#86) --- .github/workflows/pages.yml | 58 ++++++++++++++++++ r-package/maq/.Rbuildignore | 2 + r-package/maq/pkgdown/_pkgdown.yml | 30 +++++++++ r-package/maq/pkgdown/extra.js | 14 +++++ .../favicon/android-chrome-192x192.png | Bin 0 -> 5196 bytes .../favicon/android-chrome-512x512.png | Bin 0 -> 17712 bytes .../maq/pkgdown/favicon/apple-touch-icon.png | Bin 0 -> 4703 bytes .../maq/pkgdown/favicon/favicon-16x16.png | Bin 0 -> 333 bytes .../maq/pkgdown/favicon/favicon-32x32.png | Bin 0 -> 661 bytes r-package/maq/pkgdown/favicon/favicon.ico | Bin 0 -> 15406 bytes 10 files changed, 104 insertions(+) create mode 100644 .github/workflows/pages.yml create mode 100644 r-package/maq/pkgdown/_pkgdown.yml create mode 100644 r-package/maq/pkgdown/extra.js create mode 100755 r-package/maq/pkgdown/favicon/android-chrome-192x192.png create mode 100755 r-package/maq/pkgdown/favicon/android-chrome-512x512.png create mode 100755 r-package/maq/pkgdown/favicon/apple-touch-icon.png create mode 100755 r-package/maq/pkgdown/favicon/favicon-16x16.png create mode 100755 r-package/maq/pkgdown/favicon/favicon-32x32.png create mode 100755 r-package/maq/pkgdown/favicon/favicon.ico diff --git a/.github/workflows/pages.yml b/.github/workflows/pages.yml new file mode 100644 index 0000000..ff76103 --- /dev/null +++ b/.github/workflows/pages.yml @@ -0,0 +1,58 @@ +name: Deploy gh-pages + +on: + push: + branches: ["master"] + + workflow_dispatch: + +permissions: + contents: read + pages: write + id-token: write + +concurrency: + group: "pages" + cancel-in-progress: false + +jobs: + deploy: + environment: + name: github-pages + url: ${{ steps.deployment.outputs.page_url }} + runs-on: ubuntu-latest + steps: + - name: Checkout + uses: actions/checkout@v4 + - name: Build docs + working-directory: r-package/maq + run: | + # Install pandoc + sudo apt-get install -qq pandoc + + # Install R + curl -OLs https://eddelbuettel.github.io/r-ci/run.sh && chmod 0755 run.sh + ./run.sh bootstrap + ./run.sh install_all + + # Install maq + R CMD INSTALL . + + # Use pkgdown v1.5 + sudo Rscript -e "install.packages(c('fs', 'highlight', 'httr', 'memoise', 'openssl', 'purrr', 'rmarkdown', 'rstudioapi', 'whisker', 'xml2', 'yaml'))" + sudo Rscript -e "install.packages('https://cran.r-project.org/src/contrib/Archive/pkgdown/pkgdown_1.5.1.tar.gz', repos = NULL, type = 'source')" + + # Build site + cp ../../README.md . + cp ../../REFERENCE.md . + cp ../../CHANGELOG.md . + Rscript -e "pkgdown::build_site()" + - name: Setup Pages + uses: actions/configure-pages@v5 + - name: Upload artifact + uses: actions/upload-pages-artifact@v3 + with: + path: 'r-package/maq/docs' + - name: Deploy to GitHub Pages + id: deployment + uses: actions/deploy-pages@v4 diff --git a/r-package/maq/.Rbuildignore b/r-package/maq/.Rbuildignore index 8e7e468..cc134ca 100644 --- a/r-package/maq/.Rbuildignore +++ b/r-package/maq/.Rbuildignore @@ -3,3 +3,5 @@ ^docs$ ^tests/benchmarks ^tests/valgrind +^_pkgdown\.yml$ +^pkgdown$ diff --git a/r-package/maq/pkgdown/_pkgdown.yml b/r-package/maq/pkgdown/_pkgdown.yml new file mode 100644 index 0000000..7d41c8f --- /dev/null +++ b/r-package/maq/pkgdown/_pkgdown.yml @@ -0,0 +1,30 @@ +url: https://github.com/grf-labs/maq +navbar: + type: default + left: + - text: "Reference" + href: reference/index.html + - text: "Algorithm reference" + href: REFERENCE.html + - text: "Changelog" + href: CHANGELOG.html + right: + - icon: fa-github fa-lg + href: https://github.com/grf-labs/maq + +reference: + - title: Multi-Armed Qini + contents: + - maq + - predict.maq + - average_gain + - difference_gain + - integrated_difference + - get_ipw_scores + - get_aipw_scores + + - title: Plotting and printing + contents: + - plot.maq + - print.maq + - summary.maq diff --git a/r-package/maq/pkgdown/extra.js b/r-package/maq/pkgdown/extra.js new file mode 100644 index 0000000..b289a6e --- /dev/null +++ b/r-package/maq/pkgdown/extra.js @@ -0,0 +1,14 @@ +// This is a workaround to get the online documentation to produce the correct GitHub +// link to the source file in question. pkgdown assumes the package is hosted +// under the root repo, but maq is hosted under /r-package/maq. +// This fix is from: https://github.com/r-lib/pkgdown/issues/1152 +$(function() { + if(window.location.pathname.toLocaleLowerCase().indexOf('/reference') != -1) { + /* Replace '/R/' with '/r-package/maq/R/' in all external links to .R files of maq GitHub repo */ + $('a[href^="https://github.com/grf-labs/maq/blob/master/R"][href*=".R"]').attr('href', (i, val) => { return val.replace('/R/', '/r-package/maq/R/'); }); + } + if(window.location.pathname.toLocaleLowerCase().indexOf('/articles') != -1) { + /* Replace '/vignettes/' with '/r-package/maq/vignettes/' in all external links to .Rmd files of maq GitHub repo */ + 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