DESCRIPTION

Package: igvR
Type: Package
Title: igvR: integrative genomics viewer
Version: 1.27.0
Date: 2024-10-29
Author: Paul Shannon
Maintainer: Arkadiusz Gladki <gladki.arkadiusz@gmail.com>
Depends: R (>= 3.5.0), GenomicRanges,  GenomicAlignments, BrowserViz (>= 2.17.1)
Imports: methods, BiocGenerics, httpuv, utils, rtracklayer, VariantAnnotation, RColorBrewer, httr
Suggests: RUnit, BiocStyle, knitr, rmarkdown, MotifDb, seqLogo
Description: Access to igv.js, the Integrative Genomics Viewer running in a web browser.
URL: https://gladkia.github.io/igvR/
License: MIT + file LICENSE
LazyLoad: yes
biocViews: Visualization, ThirdPartyClient, GenomeBrowsers
Collate:
   'Track.R'
   'igvAnnotationTrack.R'
   'UCSCBedAnnotationTrack.R'
   'DataFrameAnnotationTrack.R'
   'VariantTrack.R'
   'QuantitativeTrack.R'
   'DataFrameQuantitativeTrack.R'
   'UCSCBedGraphQuantitativeTrack.R'
   'GRangesAnnotationTrack.R'
   'GRangesQuantitativeTrack.R'
   'GenomicAlignmentTrack.R'
   'BedpeInteractionsTrack.R'
   'RemoteAlignmentTrack.R'
   'GWASTrack.R'
   'GWASUrlTrack.R'
   'GFF3Track.R'
   'genomeSpec.R'
   'igvR.R'
NeedsCompilation: no
Packaged: 2018-03-22 20:02:10 UTC; paul
VignetteBuilder:
  knitr
Encoding: UTF-8
RoxygenNote: 7.2.3