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PhyloSift error running (Can't locate App/Cmd/Setup.pm in @INC) #487
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Hello @mdimdadi, |
I also have the same error... |
Hi, I also have the same error! |
This package seems to be dead. The authors haven’t touched the repository in years and key resource files on their website are missing. I would find another option that’s actively maintained. |
After downloading and unzipping the folder, I ran the first command with the test dataset and having the following error:
[mdimdadi@rameshgoel PhyloSift]$ bin/phylosift all --output=results --paired tutorial_data/HMP_1.fastq.gz tutorial_data/HMP_2.fastq.gz
[mdimdadi@rameshgoel PhyloSift]$ Can't locate App/Cmd/Setup.pm in @inc (@inc contains: /home/mdimdadi/Downloads/PhyloSift/bin/../lib /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at /home/mdimdadi/Downloads/PhyloSift/bin/../lib/Phylosift.pm line 2.
BEGIN failed--compilation aborted at /home/mdimdadi/Downloads/PhyloSift/bin/../lib/Phylosift.pm line 2.
Compilation failed in require at bin/phylosift line 6.
BEGIN failed--compilation aborted at bin/phylosift line 6.
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