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Run joined test on GiaB trio #9

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andreas-wilm opened this issue Jul 17, 2018 · 3 comments
Open

Run joined test on GiaB trio #9

andreas-wilm opened this issue Jul 17, 2018 · 3 comments
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enhancement New feature or request major

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@andreas-wilm
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Original report by Andreas Wilm (Bitbucket: andreas-wilm, GitHub: andreas-wilm).
@andreas-wilm
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Original comment by Andreas Wilm (Bitbucket: andreas-wilm, GitHub: andreas-wilm).

@andreas-wilm
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Original comment by Andreas Wilm (Bitbucket: andreas-wilm, GitHub: andreas-wilm).

See also https://registry.opendata.aws/giab/.
Asked JX to determine whether it's cheaper to download (cross-region?) from the open data bucket or have a local mirror

@andreas-wilm
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Original comment by Lavanya Veeravalli (Bitbucket: veeravallil, GitHub: Unknown).

/data/users/astar/gis/rpd/SG10K/rpd-sg10k-grch38-gatk4-gvcf-freebayes-vcf_trios_eval (In Progess)

@andreas-wilm andreas-wilm added major enhancement New feature or request labels Jan 9, 2019
@andreas-wilm andreas-wilm changed the title Run full GiaB tests, e.g. on Trio Run joined test on GiaB trio Jan 9, 2019
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