diff --git a/_docs/download-go-cams.md b/_docs/download-go-cams.md index 52c8ddfc..67ef0500 100644 --- a/_docs/download-go-cams.md +++ b/_docs/download-go-cams.md @@ -5,19 +5,21 @@ permalink: /docs/download-go-cams/ # Download Causal Activity Models -## GO-CAM formats -+ Released monthly -+ Taxon-specific -+ Available formats: - + [RDF Turtle (TTL)](https://www.w3.org/TR/turtle/){:target="blank"} - + [BlazeGraph Journal (JNL)](https://www.blazegraph.com/){:target="blank"} - + [Simple Interaction Format (SIF)](http://manual.cytoscape.org/en/stable/Supported_Network_File_Formats.html#sif-format){:target="blank"} - ## GO-CAM download links -+ [GO-CAM TTLs](https://s3.amazonaws.com/geneontology-public/gocam/GO-CAMs.ttl.zip) ++ [Pathway-like GO-CAMs](http://current.geneontology.org/products/ttl/pathway-like_go-cams.tar.gz) as TTLs + + + [GO-CAM JNL](http://current.geneontology.org/products/blazegraph/blazegraph-production.jnl.gz) + [GO-CAM SIFs](https://s3.amazonaws.com/geneontology-public/gocam/GO-CAMs.sif.zip) + + +## About GO-CAM formats ++ Available formats: + + [RDF Turtle (TTL)](https://www.w3.org/TR/turtle/){:target="blank"}, a textual syntax for RDF called Turtle that allows an RDF graph to be completely written in a compact and natural text form, with abbreviations for common usage patterns and datatypes. + + [BlazeGraph Journal (JNL)](https://www.blazegraph.com/){:target="blank"}, The graph store for GO-CAMs using Blazegraph; this data product is currently deprecated. See also the [GO and RDF/SPARQL guide](/docs/sparql) + + [Simple Interaction Format (SIF)](http://manual.cytoscape.org/en/stable/Supported_Network_File_Formats.html#sif-format){:target="blank"}, a format convenient for building a graph from a list of interactions. + **Notes**: * Individual TTLs (1 TTL for 1 GO-CAM) can also be retrieved from the GitHub repository [noctua-models](https://github.com/geneontology/noctua-models/tree/master/models){:target="blank"}. * When using SIFs with [Cytoscape](https://cytoscape.org/){:target="blank"}, we also provide a [gocam-styles.xml](https://s3.amazonaws.com/geneontology-public/gocam/gocam-styles.xml). Read more in the [GO-CAM documentation](/docs/gocam-overview/#visualization-in-cytoscape).