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Locus inversion showing incorrect locations #103

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AthinaGav opened this issue Oct 22, 2023 · 0 comments
Open

Locus inversion showing incorrect locations #103

AthinaGav opened this issue Oct 22, 2023 · 0 comments

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@AthinaGav
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I am using clinker to visualize some gene clusters. I want to hide some genes so I dragged the handles from both sides. In the original orientation all looks correct:
clinker_original_untrimmed_example

But I noticed that when double-clicking on a locus to reverse it, the location shown underneath the locus name changes completely. I do not understand where this new location comes from. See an example below:

Original orientation trimmed locus and location limits:
clinker_original_example

Reversed trimmed locus and location limits:
clinker_reversed_example

Is this a bug? Or is there some logic behind the new location that I am missing? Please advise.

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