diff --git a/scripts/searchfirst.py b/scripts/searchfirst.py index f5bb888..6ffe3c3 100644 --- a/scripts/searchfirst.py +++ b/scripts/searchfirst.py @@ -5,6 +5,7 @@ """SearchFirst script to run a simple segmentation.""" import typer + from faim_wako_searchfirst.main import run diff --git a/tests/test_cellpose.py b/tests/test_cellpose.py index 5447d40..99fc161 100644 --- a/tests/test_cellpose.py +++ b/tests/test_cellpose.py @@ -9,6 +9,7 @@ from pathlib import Path import pytest + from faim_wako_searchfirst.main import run diff --git a/tests/test_filter.py b/tests/test_filter.py index 2e77173..6f0f412 100644 --- a/tests/test_filter.py +++ b/tests/test_filter.py @@ -8,9 +8,10 @@ import numpy as np import pytest -from faim_wako_searchfirst.filter import border, dilate, feature from skimage.io import imread +from faim_wako_searchfirst.filter import border, dilate, feature + @pytest.fixture def _label_image(): diff --git a/tests/test_main.py b/tests/test_main.py index 910c14d..4b99c33 100644 --- a/tests/test_main.py +++ b/tests/test_main.py @@ -11,11 +11,12 @@ import numpy as np import pandas as pd import pytest +from skimage.io import imread + from faim_wako_searchfirst.filter import area, bounding_box, solidity from faim_wako_searchfirst.main import run from faim_wako_searchfirst.sample import centers, dense_grid, grid_overlap from faim_wako_searchfirst.segment import threshold -from skimage.io import imread @pytest.fixture diff --git a/tests/test_sample.py b/tests/test_sample.py index 74cfd36..a4d9078 100644 --- a/tests/test_sample.py +++ b/tests/test_sample.py @@ -8,9 +8,10 @@ import pandas as pd import pytest -from faim_wako_searchfirst.sample import object_centered_grid, region_centered_grid from skimage.io import imread +from faim_wako_searchfirst.sample import object_centered_grid, region_centered_grid + @pytest.fixture def _label_image():