From 8adef53b59b8b273bc7491eba983d3d9c9126339 Mon Sep 17 00:00:00 2001 From: Taylor Salo Date: Sat, 15 Sep 2018 18:51:10 -0400 Subject: [PATCH] Update cis_proc.py --- cis_proc.py | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/cis_proc.py b/cis_proc.py index 37b01ce..3f0baee 100755 --- a/cis_proc.py +++ b/cis_proc.py @@ -95,9 +95,9 @@ def main(argv=None): with open(args.config, 'r') as fo: config_options = json.load(fo) - bidsifier_file = op.join('/home/data/nbc/singularity-images/', + bidsifier_file = op.join('/home/data/cis/singularity-images/', config_options['bidsifier']) - mriqc_file = op.join('/home/data/nbc/singularity-images/', + mriqc_file = op.join('/home/data/cis/singularity-images/', config_options['mriqc']) mriqc_version = op.basename(mriqc_file).split('-')[0].split('_')[-1] @@ -107,7 +107,7 @@ def main(argv=None): # Additional checks and copying for heuristics file heuristics_file = config_options['heuristics'] if not heuristics_file.startswith('/'): - heuristics_file = op.join('/home/data/nbc/cis_dataqc/cis-processing', + heuristics_file = op.join('/home/data/cis/cis-processing', heuristics_file) if not op.isfile(heuristics_file):