cd_publish.yml

name: CD_publish

on:
  push:

#on:
#  push:
#    branches:
#      - '[0-9]+.[0-9]+.[0-9]+'
#      - '[0-9]+.[0-9]+.[0-9]+-*'
#
  # Allows you to run this workflow manually from the Actions tab
  workflow_dispatch:

jobs:
  build:
    runs-on: ubuntu-latest

    steps:
      - uses: actions/checkout@v4

      - name: Setup Python 3.11
        uses: actions/setup-python@v5
        with:
          python-version: 3.11

      - name: Install EMMOntoPy and pyvode
        run: |
          pip install --upgrade pip
          pip install EMMOntoPy pylode==2.13.2

      - name: Create build directory
        run: mkdir build

      - name: Copy json-ld context
        run: cp -r context build/.

      - name: Generate squashed ontology
        run: ontoconvert -saw \
          -c http://www.w3.org/2004/02/skos/core#prefLabel-->http://www.w3.org/2000/01/rdf-schema#label \
          -c elucidation-->http://www.w3.org/2000/01/rdf-schema#comment \
          -c definition-->http://www.w3.org/2000/01/rdf-schema#comment \
          oteio.ttl build/oteio.ttl
          #-c comment-->http://www.w3.org/2000/01/rdf-schema#comment

      - name: Generate inferred ontology
        run: ontoconvert -saw --reasoner=HermiT \
          -c http://www.w3.org/2004/02/skos/core#prefLabel-->http://www.w3.org/2000/01/rdf-schema#label \
          -c elucidation-->http://www.w3.org/2000/01/rdf-schema#comment \
          -c definition-->http://www.w3.org/2000/01/rdf-schema#comment \
          oteio.ttl build/oteio-inferred.ttl
          #-c comment-->http://www.w3.org/2000/01/rdf-schema#comment

      - name: Generate documentation
        run: pylode -i build/oteio-inferred.ttl -o build/oteio.html -p ontdoc

      - name: Deploy
        uses: JamesIves/github-pages-deploy-action@v4
        with:
          folder: build  # The folder the action should deploy.