bandbox.cfg

[bandbox]
file_extensions = jpg|jpeg|mrc|mrcs|tif|tiff|dm4|txt|box|cfg|fixed|st|rec|map|bak|eer|bz2|gz|zip|xml|am|star|raw|dat|json|zarr|md
obvious_files = file|files|data|folder|inner[-_]folder|images|directory|dataset.*
max_files = 2000
max_name_length = 50
# date_infix_chars must start with '-'
date_infix_chars = -:/.
month_chars = jan|feb|mar|apr|may|jun|jul|aug|sep|oct|nov|dec|january|february|march|april|may|june|july|august|september|october|november|december
accession_names = EMPIAR|EMDB
odd_chars = &?! ,
periods_in_name_fewer_than = 2
external_refs = figure|supplementary

[regex]
file_re = (?i)^([^.]*\.[^.]*|.*\.(${bandbox:file_extensions}))$$
file_extension_re = (?i)^.*\.(${bandbox:file_extensions})$$
obvious_files_re = (?i)^(${bandbox:obvious_files})$$
accession_names_re = (?i)^.*(${bandbox:accession_names}).*$$
odd_chars_re = .*[${bandbox:odd_chars}].*
periods_in_name_fewer_than_re = .*([.].*){${bandbox:periods_in_name_fewer_than},}.*
external_refs_re = (?i)^.*(${bandbox:external_refs}).*$$
# 12/31/2000 or 31/12/2000
# 2000[]12[]31 or 2000[]31[]12
# 31[]12[]00
# 31[]Dec[]2000
# Dec[]31[]2000
date_re = (?i)^.*\d{2}[${bandbox:date_infix_chars}]*\d{2}[${bandbox:date_infix_chars}]*\d{4}.*$$,(?i)^.*\d{4}[${bandbox:date_infix_chars}]*\d{2}[${bandbox:date_infix_chars}]*\d{2}.*$$,(?i)^.*\d{2}[${bandbox:date_infix_chars}]*\d{2}[${bandbox:date_infix_chars}]*\d{2}.*$$,(?i)^.*\d{2}[${bandbox:date_infix_chars}]*(${bandbox:month_chars})[${bandbox:date_infix_chars}]*\d{4}.*$$,(?i)^.*\d{4}[${bandbox:date_infix_chars}]*(${bandbox:month_chars})[${bandbox:date_infix_chars}]*\d{2}.*$$