pyproject.toml

[build-system]
requires = ["setuptools"]
build-backend = "setuptools.build_meta"

[project]
name = "SPACEtomo"
dynamic = ["version"]
description = "Smart Parallel Automated Cryo Electron tomography (SPACEtomo) is a package that - together with SerialEM - completely automates the cryoET data acquisition workflow."
readme = "README.md"
requires-python = ">=3.6,!=3.7.*,!=3.8.*,!=3.10.*" # SerialEM does not support 3.10
license = {file = "LICENSE"}
keywords = ["SPACEtomo", "cryoET", "tomography", "electron-tomography", "SerialEM"]
maintainers = [
    {name = "Fabian Eisenstein", email = "fabian.eisenstein@ethz.ch"}
]
dependencies = [
  "matplotlib>=3.5; python_version>='3.9'",
  "mrcfile>=1.5.0; python_version>='3.9'",
  "numpy>=1.26.4; python_version>='3.9'",
  "Pillow>=10.4.0; python_version>='3.9'",
  "scipy>=1.12.0; python_version>='3.9'",
  "scikit-image>=0.22.0; python_version>='3.9'",

  "matplotlib>=3.3; python_version<'3.7'",
  "mrcfile>=1.5; python_version<'3.7'",
  "numpy>=1.19; python_version<'3.7'",
  "Pillow>=8.0; python_version<'3.7'",
  "scipy>=1.5; python_version<'3.7'",
  "scikit-image>=0.17; python_version<'3.7'",
  "imageio==2.15.0; python_version<'3.7'" # max version 2.16.0 needs numpy>=1.20
]

[project.optional-dependencies]
gui = [
  "dearpygui>=1.10.0; python_version>='3.9'"
]
predict = [
  "torch>=2.2.0; python_version>='3.9'", 
  "torchvision>=0.17.0; python_version>='3.9'", 
  "nnunetv2>=2.2.1; python_version>='3.9'", 
  "ultralytics>=8.1.12; python_version>='3.10'",
  "ultralytics>=8.1.12,<8.3.10; python_version=='3.9'"
]

[project.scripts]
SPACEtomo = "SPACEtomo.CLI:main"
SPACEmonitor = "SPACEtomo.run_monitor:main"
SPACEmodel = "SPACEtomo.setup_model:main"
SPACEconfig = "SPACEtomo.setup_config:main"

[project.urls]
Homepage = "https://github.com/eisfabian/SPACEtomo"
Documentation = "https://github.com/eisfabian/SPACEtomo/blob/main/README.md"
Repository = "https://github.com/eisfabian/SPACEtomo"
Issues = "https://github.com/eisfabian/SPACEtomo/issues"

[tool.setuptools.dynamic]
version = {attr = "SPACEtomo.__version__"}

[tool.setuptools.packages]
find = {}