SelectSequencesFromMSA.cabal

name:                SelectSequencesFromMSA
version:             1.0.5
synopsis:            Selects a representative subset of sequences from multiple sequence alignment.
description:         SelectSequences is a tool for selection of a representative subset of sequences from a multiple sequence alignment in clustal format.
                     .
                     Optional Dependencies:
                     .
                     * <https://www.tbi.univie.ac.at/~wash/RNAz/ RNAz>
                     
                     Installation via cabal-install:
                     .
                     > cabal install SelectSequencesFromMSA

license:             GPL-3
license-file:        LICENSE
author:              Florian Eggenhofer
maintainer:          egg@informatik.uni.freiburg.de
category:            Bioinformatics
build-type:          Simple
cabal-version:       >=1.8
Tested-With: GHC == 7.10.3, GHC == 8.2.2

source-repository head
  type:     git
  location: https://github.com/eggzilla/SelectSequencesFromMSA

source-repository this
  type:     git
  location: https://github.com/eggzilla/SelectSequencesFromMSA/tree/1.0.5
  tag:      1.0.5
                     
executable SelectSequencesFromMSA
  Hs-Source-Dirs:      ./src/Bio/
  main-is:             SelectSequences.hs
  ghc-options:         -Wall
  build-depends:       base >=4.5 && <5, cmdargs, either-unwrap, SelectSequencesFromMSA, directory

Library
  Hs-Source-Dirs:      ./src/
  ghc-options:         -Wall -fno-warn-unused-do-bind
  build-depends:       base >=4.5 && <5, cmdargs, ViennaRNAParser>=1.3.2, process, directory, biofasta, parsec, biocore, bytestring, either-unwrap, containers, ClustalParser>=1.2.3, vector, matrix, filepath, text, transformers, text-metrics
  Exposed-Modules:     Bio.SelectSequencesLibrary