Eli Holmes
This is a package for exploring some of the CoV-19 data. The world data is downloaded from JHU. The US data is downloaded from JHU and CovidTracking. The Italy data is downloaded from the Italian CDC (Protezione Civile)
Sources:
- https://github.com/CSSEGISandData/COVID-19
- https://covidtracking.com/api/
- https://github.com/pcm-dpc/COVID-19
To install the package
library(devtools)
install_github(eeholmes/CoV19)
To get the data, type any of these on command line. After loading.
states
italy
world
Use head() to look at it. Should be pretty self-evident what it is.
regions()will show you the regions in each data set.plot2()a basic plot of total, hospitalized, and deaths. First argument is a data object (states, italy, world or subset of these) and second argument is a region (can be partial). Use ?plot2 to read the help page.
library(CoV19)
plot2(italy, "Lomb", decorate=TRUE)
plot2(states, c("WA","CA"))
plot2(states, c("NY","NJ","PA","MA"))
Something is odd with the Hubei data in the JHU data set.
plot2(world, "Hubei China", decorate=TRUE)