deploy.yaml

name: Deploy to shinyapps.io

'on':
  # run on any push 
  push:
    branches: 
      - main
    paths:
      - 'R/**'
      - 'data/**'
      - '.pipelines/deploy.R'
      - 'renv.lock'
  # Allow to be called by other workflow
  # workflow_call:
  # run on request (via button in actions menu)
  workflow_dispatch:

env:
  SHINYAPPS_ACCOUNT: ${{ secrets.SHINYAPPS_ACCOUNT }}
  # token and secret obtained from https://www.shinyapps.io/admin/#/tokens
  SHINYAPPS_TOKEN: ${{ secrets.SHINYAPPS_TOKEN }}
  SHINYAPPS_SECRET: ${{ secrets.SHINYAPPS_SECRET }}

jobs:
  deploy:
    name: Deploy to shinyapps

    # allow skipping deployment for commits containing '[automated]' or '[no-deploy]' in the commit message
    if: "!contains(github.event.head_commit.message, '[automated]') && !contains(github.event.head_commit.message, '[no-deploy]')"
    runs-on: ubuntu-latest
    steps:
      - name: Check-out repo
        uses: actions/checkout@v4

      - name: 'Install R'
        uses: r-lib/actions/setup-r@v2
        with:
          r-version: renv
          use-public-rspm: true
      
      - name: Install system dependencies
        run: sudo apt-get install --yes libgdal-dev libgeos-dev libproj-dev libudunits2-dev

      - name: Setup {renv}
        uses: r-lib/actions/setup-renv@v2

      - name: Setup {pandoc}
        uses: r-lib/actions/setup-pandoc@v2

      - name: Deploy app
        run: Rscript .pipelines/deploy.R