From bc40ee7b22e5598565b0e3ba16d23170141b3ee8 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Alfonso=20Mu=C3=B1oz-Pomer=20Fuentes?= Date: Tue, 13 Jun 2023 11:22:37 +0100 Subject: [PATCH] Use nice strings for DIMRED_TYPE To be consistent with the V19 migration in `atlas-schemas`. --- tests/test_dimred_load.sh | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/tests/test_dimred_load.sh b/tests/test_dimred_load.sh index e9f2c1b..46e1dc3 100755 --- a/tests/test_dimred_load.sh +++ b/tests/test_dimred_load.sh @@ -6,7 +6,7 @@ delete_db_scxa_dimred.sh # do it just for testing ls ${EXPERIMENT_DIMRED_PATH}/${EXP_ID}.tsne*.tsv | while read -r l; do - export DIMRED_TYPE=tsne + export DIMRED_TYPE=t-SNE export DIMRED_FILE_PATH=$l paramval=$(echo "$l" | sed 's/.*[^0-9]\([0-9]*\).tsv/\1/g') export DIMRED_PARAM_JSON='[{"perplexity": '$paramval'}]' @@ -14,7 +14,7 @@ ls ${EXPERIMENT_DIMRED_PATH}/${EXP_ID}.tsne*.tsv | while read -r l; do done ls ${EXPERIMENT_DIMRED_PATH}/${EXP_ID}.umap*.tsv | while read -r l; do - export DIMRED_TYPE=umap + export DIMRED_TYPE=UMAP export DIMRED_FILE_PATH=$l paramval=$(echo "$l" | sed 's/.*[^0-9]\([0-9]*\).tsv/\1/g') export DIMRED_PARAM_JSON='[{"n_neighbors": '$paramval'}]'