diff --git a/Dockerfile b/Dockerfile
index c3b59cc..e1abbaf 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -1,4 +1,4 @@
-FROM quay.io/ebigxa/atlas-db-scxa-base:0.1.0
+FROM quay.io/ebigxa/atlas-db-scxa-base:0.15.0.0
 # debian
 
 ADD bin/* /usr/local/bin/
diff --git a/bin/add_exps_to_collection.sh b/bin/add_exps_to_collection.sh
index 3a7bd0e..b34ca09 100755
--- a/bin/add_exps_to_collection.sh
+++ b/bin/add_exps_to_collection.sh
@@ -2,8 +2,7 @@
 
 set -e
 
-scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )
-source $scriptDir/db_scxa_common.sh
+scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]:-$0}" )" &> /dev/null && pwd )
 
 dbConnection=${dbConnection:-$1}
 COLL_ID=${COLL_ID:-$2}
diff --git a/bin/common_routines.sh b/bin/common_routines.sh
index ae67b31..c9a68d4 100644
--- a/bin/common_routines.sh
+++ b/bin/common_routines.sh
@@ -12,3 +12,16 @@ get_host_from_hostport() {
 get_port_from_hostport() {
   echo $(echo $1 | awk -F':' '{ print $2 }')
 }
+
+checkDatabaseConnection() {
+  pg_user=$(echo $1 | sed s+postgresql://++ | awk -F':' '{ print $1}')
+  pg_host_port=$(echo $1 | awk -F':' '{ print $3}' \
+           | awk -F'@' '{ print $2}' | awk -F'/' '{ print $1 }')
+  pg_host=$(echo $pg_host_port  | awk -F':' '{print $1}')
+  pg_port=$(echo $pg_host_port  | awk -F':' '{print $2}')
+  if [ ! -z "$pg_port" ]; then
+    pg_isready -U $pg_user -h $pg_host -p $pg_port || (echo "No db connection." && exit 1)
+  else
+    pg_isready -U $pg_user -h $pg_host || (echo "No db connection" && exit 1)
+  fi
+}
\ No newline at end of file
diff --git a/bin/create_collection.sh b/bin/create_collection.sh
index bc88cf1..d119e66 100755
--- a/bin/create_collection.sh
+++ b/bin/create_collection.sh
@@ -2,8 +2,8 @@
 
 set -e
 
-scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )
-source $scriptDir/db_scxa_common.sh
+scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]:-$0}" )" &> /dev/null && pwd )
+source $scriptDir/common_routines.sh
 
 dbConnection=${dbConnection:-$1}
 COLL_ID=${COLL_ID:-$2}
diff --git a/bin/db_scxa_common.sh b/bin/db_scxa_common.sh
deleted file mode 100644
index 9a84d36..0000000
--- a/bin/db_scxa_common.sh
+++ /dev/null
@@ -1,14 +0,0 @@
-#!/usr/bin/env bash
-
-checkDatabaseConnection() {
-  pg_user=$(echo $1 | sed s+postgresql://++ | awk -F':' '{ print $1}')
-  pg_host_port=$(echo $1 | awk -F':' '{ print $3}' \
-           | awk -F'@' '{ print $2}' | awk -F'/' '{ print $1 }')
-  pg_host=$(echo $pg_host_port  | awk -F':' '{print $1}')
-  pg_port=$(echo $pg_host_port  | awk -F':' '{print $2}')
-  if [ ! -z "$pg_port" ]; then
-    pg_isready -U $pg_user -h $pg_host -p $pg_port || (echo "No db connection." && exit 1)
-  else
-    pg_isready -U $pg_user -h $pg_host || (echo "No db connection" && exit 1)
-  fi
-}
diff --git a/bin/delete_collection.sh b/bin/delete_collection.sh
index 546b927..2283983 100755
--- a/bin/delete_collection.sh
+++ b/bin/delete_collection.sh
@@ -2,8 +2,7 @@
 
 set -e
 
-scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )
-source $scriptDir/db_scxa_common.sh
+scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]:-$0}" )" &> /dev/null && pwd )
 
 dbConnection=${dbConnection:-$1}
 COLL_ID=${COLL_ID:-$2}
diff --git a/bin/delete_exp_from_collection.sh b/bin/delete_exp_from_collection.sh
index c6d43a8..7cd696a 100755
--- a/bin/delete_exp_from_collection.sh
+++ b/bin/delete_exp_from_collection.sh
@@ -2,8 +2,8 @@
 
 set -e
 
-scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )
-source $scriptDir/db_scxa_common.sh
+scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]:-$0}" )" &> /dev/null && pwd )
+source $scriptDir/common_routines.sh
 
 dbConnection=${dbConnection:-$1}
 COLL_ID=${COLL_ID:-$2}
diff --git a/bin/get_experiment_info.sh b/bin/get_experiment_info.sh
index 4096cf1..490dd78 100755
--- a/bin/get_experiment_info.sh
+++ b/bin/get_experiment_info.sh
@@ -2,8 +2,7 @@
 
 set -e
 
-scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )
-source $scriptDir/db_scxa_common.sh
+scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]:-$0}" )" &> /dev/null && pwd )
 
 postgres_scripts_dir=$scriptDir/../postgres_routines
 
diff --git a/bin/load_db_scxa_analytics.sh b/bin/load_db_scxa_analytics.sh
index 05779a7..567880a 100755
--- a/bin/load_db_scxa_analytics.sh
+++ b/bin/load_db_scxa_analytics.sh
@@ -12,8 +12,8 @@
 # - Postprocess table and attach it to the main scxa-analytics table.
 set -e
 
-scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )
-source $scriptDir/db_scxa_common.sh
+scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]:-$0}" )" &> /dev/null && pwd )
+source $scriptDir/common_routines.sh
 
 postgres_scripts_dir=$scriptDir/../postgres_routines
 
diff --git a/bin/load_db_scxa_analytics_pg9.sh b/bin/load_db_scxa_analytics_pg9.sh
index ca89825..8a46264 100755
--- a/bin/load_db_scxa_analytics_pg9.sh
+++ b/bin/load_db_scxa_analytics_pg9.sh
@@ -10,8 +10,8 @@
 #   PG10, which loads each experiment into a different partition.
 set -e
 
-scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )
-source $scriptDir/db_scxa_common.sh
+scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]:-$0}" )" &> /dev/null && pwd )
+source $scriptDir/common_routines.sh
 
 dbConnection=${dbConnection:-$1}
 EXP_ID=${EXP_ID:-$2}
diff --git a/bin/load_db_scxa_cell_clusters.sh b/bin/load_db_scxa_cell_clusters.sh
index 7c1c4d7..bc7e18a 100755
--- a/bin/load_db_scxa_cell_clusters.sh
+++ b/bin/load_db_scxa_cell_clusters.sh
@@ -5,8 +5,8 @@
 # scxa_cell_group_membership table of AtlasProd.
 set -e
 
-scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )
-source $scriptDir/db_scxa_common.sh
+scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]:-$0}" )" &> /dev/null && pwd )
+source $scriptDir/common_routines.sh
 
 dbConnection=${dbConnection:-$1}
 EXP_ID=${EXP_ID:-$2}
diff --git a/bin/load_db_scxa_dimred.sh b/bin/load_db_scxa_dimred.sh
index 31f17b6..2878f07 100755
--- a/bin/load_db_scxa_dimred.sh
+++ b/bin/load_db_scxa_dimred.sh
@@ -5,15 +5,15 @@
 # parameterisations, and loads it into the scxa_coords table of AtlasProd.
 set -e
 
-scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )
-source $scriptDir/db_scxa_common.sh
+scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]:-$0}" )" &> /dev/null && pwd )
+source $scriptDir/common_routines.sh
 
 dbConnection=${dbConnection:-$1}
 EXP_ID=${EXP_ID:-$2}
 DIMRED_TYPE=${DIMRED_TYPE:-$3}
 DIMRED_FILE_PATH=${DIMRED_FILE_PATH:-$4}
 DIMRED_PARAM_JSON=${DIMRED_PARAM_JSON:-$5}
-SCRATCH_DIR=${SCRATCH_DIR:-"$(dirname ${DIMRED_FILE_PATH})"}
+SCRATCH_DIR=${SCRATCH_DIR:-"$DIMRED_FILE_PATH"}
 
 # Check that necessary environment variables are defined.
 [ -n ${dbConnection+x} ] || (echo "Env var dbConnection for the database connection needs to be defined. This includes the database name." && exit 1)
diff --git a/bin/load_db_scxa_marker_genes.sh b/bin/load_db_scxa_marker_genes.sh
index 89067fb..ea9e05b 100755
--- a/bin/load_db_scxa_marker_genes.sh
+++ b/bin/load_db_scxa_marker_genes.sh
@@ -6,8 +6,8 @@
 # scxa_cell_groups_marker_genes table of AtlasProd.
 set -e
 
-scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )
-source $scriptDir/db_scxa_common.sh
+scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]:-$0}" )" &> /dev/null && pwd )
+source $scriptDir/common_routines.sh
 
 dbConnection=${dbConnection:-$1}
 EXP_ID=${EXP_ID:-$2}
diff --git a/bin/load_exp_design.awk b/bin/load_exp_design.awk
new file mode 100644
index 0000000..389b773
--- /dev/null
+++ b/bin/load_exp_design.awk
@@ -0,0 +1,13 @@
+# Return the index of the first field that matches the given pattern, or 0 if it’s not found
+{
+  for (i = 1; i <= NF; ++i) {
+    field = $i;
+    if (field ~ pattern) {
+      print i;
+      exit;
+    }
+  }
+
+  print 0;
+  exit;
+}
diff --git a/bin/load_exp_design.sh b/bin/load_exp_design.sh
index 48bf5cf..259dedb 100755
--- a/bin/load_exp_design.sh
+++ b/bin/load_exp_design.sh
@@ -1,46 +1,59 @@
 #!/usr/bin/env bash
-
 set -e
+SCRIPT_DIR=$( cd -- "$( dirname -- "${BASH_SOURCE[0]:-$0}" )" &> /dev/null && pwd )
+source "${SCRIPT_DIR}/common_routines.sh"
 
-scriptDir=$(cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )
-source $scriptDir/db_scxa_common.sh
-
+# Alfonso is bothered about dbConnection, it shouldn’t be camelCased because:
+# 1. It’s a constant, it should be DB_CONNECTION
+# 2. We use snake_case for Bash variables
 dbConnection=${dbConnection:-$1}
-condensed_sdrf_file=${CONDENSED_SDRF_FILE:-$2}
-sdrf_file=${SDRF_FILE:-$3}
-
-# Check that necessary environment variables are defined.
-[ -z ${dbConnection+x} ] && echo "Env var dbConnection for the database connection needs to be defined. This includes the database name." && exit 1
-[ -z ${CONDENSED_SDRF_FILE+x} ] && echo "Env var CONDENSED_SDRF_FILE for the experiment design data needs to be defined." && exit 1
-[ -z ${SDRF_FILE+x} ] && echo "Env var SDRF_FILE for column sequence of experiment design needs to be defined." && exit 1
-
-# Reason for creating this array is to search factor value column
-# In some sdrf files this column is mentioned as "Factor Value" and in some as "FactorValue"
-FactorArray=( FactorValue "Factor Value" )
-
-# for experiment design column table we need to have unique experiment accession, column name and sample type
-# as they are the primary key for the table and we don't want to insert duplicate rows
-cut -f 1,4,5 $condensed_sdrf_file | sort | uniq | while read exp_acc sample_type col_name;
-do
-  if [ $sample_type == 'characteristic' ]
-        then
-            search_column="Characteristics[${col_name}]"
-            column_order=$(awk -v val="$search_column" -F '\t' '{for (i=1; i<=NF; i++) if ($i==val) {print i} }' $sdrf_file)
-        else
-            for element in "${FactorArray[@]}"; do
-                search_column="$element[${col_name}]"
-                column_order=$(awk -v val="$search_column" -F '\t' '{for (i=1; i<=NF; i++) if ($i==val) {print i} }' $sdrf_file)
-                if [[ -n "${column_order}" ]]; then
-                    break
-                fi
-            done
-        fi
-        echo "INSERT INTO exp_design_column (experiment_accession, column_name, sample_type, column_order) VALUES ('$exp_acc', '$col_name', '$sample_type', '$column_order');" | psql -v ON_ERROR_STOP=1 $dbConnection
+CONDENSED_SDRF_FILE=${CONDENSED_SDRF_FILE:-$2}
+SDRF_FILE=${SDRF_FILE:-$3}
+
+# Check that necessary environment variables are defined
+require_env_var "dbConnection"
+require_env_var "CONDENSED_SDRF_FILE"
+require_env_var "SDRF_FILE"
+checkDatabaseConnection "${dbConnection}"
+
+EXPERIMENT_ACCESSION=$(head -1 "${CONDENSED_SDRF_FILE}" | cut -f 1)
+DESTINATION_FILE=${SCRATCH_DIR:-${SCRIPT_DIR}}/${EXPERIMENT_ACCESSION}-exp-design.sql
+# Remove DESTINATION_FILE if it exists
+rm -f ${DESTINATION_FILE}
+
+# Create the file and enclose all INSERT statements in a transaction
+echo "BEGIN;" >> ${DESTINATION_FILE}
+
+# In the experiment design column table we use the experiment accession, column name and sample type as the primary key
+cut -f 1,4,5 "${CONDENSED_SDRF_FILE}" | sort | uniq | while read experiment_accession sample_type column_name; do
+  if [ "$sample_type" == 'characteristic' ]; then
+    sdrf_column_index=$(awk -F '\t' -v pattern="^Characteristics ?\\\[${column_name}\\\]$" -f ${SCRIPT_DIR}/load_exp_design.awk ${SDRF_FILE})
+  else
+    sdrf_column_index=$(awk -F '\t' -v pattern="^Factor ?Value ?\\\[${column_name}\\\]$" -f ${SCRIPT_DIR}/load_exp_design.awk ${SDRF_FILE})
+  fi
+  sql_statement="INSERT INTO exp_design_column (experiment_accession, sample_type, column_name, column_order) VALUES ('${experiment_accession}', '${sample_type}', '${column_name}', '${sdrf_column_index}');"
+  echo "${sql_statement}" >> ${DESTINATION_FILE}
 done
 
-while IFS=$'\t' read exp_acc sample sample_type col_name annot_value annot_url
-do
-  echo "INSERT INTO exp_design (sample, annot_value, annot_ont_uri, exp_design_column_id) VALUES ('$sample', '$annot_value', '$annot_url', (SELECT id FROM exp_design_column WHERE experiment_accession='$exp_acc' AND column_name='$col_name' AND sample_type='$sample_type'));" | psql -v ON_ERROR_STOP=1 $dbConnection
-done < $condensed_sdrf_file
+# Add the columns from the condensed SDRF file.
+# Fields in the condensed SDRF that aren’t in the SDRF are assigned a column_order value of 0 by the AWK script.
+# We need to assign them a value that is greater than the maximum column_order value for the experiment.
+# The column_order value is used to order the columns in the UI and is not used for the primary key, so it’s ok to have
+# duplicates; we can order the fields with the same column_order by name if necessary.
+sql_statement="UPDATE exp_design_column SET column_order=(SELECT MAX(column_order) FROM exp_design_column WHERE experiment_accession='${EXPERIMENT_ACCESSION}')+1 WHERE column_order=0 AND experiment_accession='${EXPERIMENT_ACCESSION}';"
+echo "${sql_statement}" >> ${DESTINATION_FILE}
+
+# Insert the experiment design data.
+while IFS=$'\t' read -r experiment_accession sample sample_type column_name annotation_value annotation_url; do
+  sql_statement="INSERT INTO exp_design (sample, annot_value, annot_ont_uri, exp_design_column_id) VALUES ('${sample}', '${annotation_value}', '${annotation_url}', (SELECT id FROM exp_design_column WHERE experiment_accession='${experiment_accession}' AND column_name='${column_name}' AND sample_type='${sample_type}'));"
+  echo "${sql_statement}" >> ${DESTINATION_FILE}
+done < "$CONDENSED_SDRF_FILE"
+
+# Finish the transaction
+echo "COMMIT;" >> ${DESTINATION_FILE}
+
+PSQL_CMD="psql -qv ON_ERROR_STOP=1 ${dbConnection} -f ${DESTINATION_FILE}"
+echo ${PSQL_CMD}
+eval ${PSQL_CMD}
 
-echo "Experiment design data done loading for $condensed_sdrf_file"
\ No newline at end of file
+echo "$CONDENSED_SDRF_FILE: finished loading experiment design"
diff --git a/bin/load_experiment_web_cli.sh b/bin/load_experiment_web_cli.sh
index d0cebc6..14f9baf 100755
--- a/bin/load_experiment_web_cli.sh
+++ b/bin/load_experiment_web_cli.sh
@@ -1,26 +1,24 @@
 #!/usr/bin/env bash
 # 
 # This script:
-# - Checks if the experiment is loaded and stops it is already loaded.
-# - Adds the appropiate line to the experiments table if it doesn't exist.
-# - Generates the experiment design file from condensed SDRF and SDRF files in $EXPERIMENT_FILES/expdesign
+# - Checks if the experiment is loaded and stops if it is already loaded.
+# - Adds the appropriate line to the experiments table if it doesn't exist.
+# - Generates the experiment design file from condensed SDRF and SDRF files in $EXPERIMENT_DESIGN_FILES
 #
 # Most of the variables required for this are usually defined in the environment file for each setup (test, prod, etc).
-# The experiment designs file might need to be synced to an appropiate location at the web application instance disk
+# The experiment designs file might need to be synced to an appropriate location at the web application instance disk
 # depending on how the setup disk layout.
 
 jar_dir=$CONDA_PREFIX/share/atlas-cli
 
-scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )
+scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]:-$0}" )" &> /dev/null && pwd )
 source $scriptDir/common_routines.sh
 
 echo "CONDA_PREFIX: $CONDA_PREFIX"
 
-require_env_var "SOLR_HOST"
-require_env_var "ZK_HOST"
-require_env_var "ZK_PORT"
 require_env_var "BIOENTITIES"
 require_env_var "EXPERIMENT_FILES"
+require_env_var "EXPERIMENT_DESIGN_FILES"
 require_env_var "jdbc_url"
 require_env_var "jdbc_username"
 require_env_var "jdbc_password"
@@ -28,17 +26,9 @@ require_env_var "jdbc_password"
 # Either ACCESSIONS or PRIVATE_ACCESSIONS need to be provided
 #require_env_var "ACCESSIONS"
 
-SOLR_PORT=$(get_port_from_hostport $SOLR_HOST)
-SOLR_HOST=$(get_host_from_hostport $SOLR_HOST)
-
-require_env_var "SOLR_PORT"
-
-java_opts="-Dsolr.host=$SOLR_HOST"
-java_opts="$java_opts -Dsolr.port=$SOLR_PORT"
-java_opts="$java_opts -Dzk.host=$ZK_HOST"
-java_opts="$java_opts -Dzk.port=$ZK_PORT"
 java_opts="$java_opts -Ddata.files.location=$BIOENTITIES"
 java_opts="$java_opts -Dexperiment.files.location=$EXPERIMENT_FILES"
+java_opts="$java_opts -Dexperiment.design.location=$EXPERIMENT_DESIGN_FILES"
 java_opts="$java_opts -Djdbc.url=$jdbc_url"
 java_opts="$java_opts -Djdbc.username=$jdbc_username"
 java_opts="$java_opts -Djdbc.password=$jdbc_password"
diff --git a/bin/modify_collection.sh b/bin/modify_collection.sh
index e7f08e4..0af83f2 100755
--- a/bin/modify_collection.sh
+++ b/bin/modify_collection.sh
@@ -2,8 +2,7 @@
 
 set -e
 
-scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )
-source $scriptDir/db_scxa_common.sh
+scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]:-$0}" )" &> /dev/null && pwd )
 
 dbConnection=${dbConnection:-$1}
 COLL_ID=${COLL_ID:-$2}
diff --git a/bin/update_experiment_web_cli.sh b/bin/update_experiment_web_cli.sh
index 2c6d8fa..f2ebd80 100755
--- a/bin/update_experiment_web_cli.sh
+++ b/bin/update_experiment_web_cli.sh
@@ -11,32 +11,22 @@
 
 jar_dir=$CONDA_PREFIX/share/atlas-cli
 
-scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )
+scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]:-$0}" )" &> /dev/null && pwd )
 source $scriptDir/common_routines.sh
 
 echo "CONDA_PREFIX: $CONDA_PREFIX"
 
-require_env_var "SOLR_HOST"
-require_env_var "ZK_HOST"
-require_env_var "ZK_PORT"
 require_env_var "BIOENTITIES"
 require_env_var "EXPERIMENT_FILES"
+require_env_var "EXPERIMENT_DESIGN_FILES"
 require_env_var "jdbc_url"
 require_env_var "jdbc_username"
 require_env_var "jdbc_password"
 require_env_var "ACCESSIONS"
 
-SOLR_PORT=$(get_port_from_hostport $SOLR_HOST)
-SOLR_HOST=$(get_host_from_hostport $SOLR_HOST)
-
-require_env_var "SOLR_PORT"
-
-java_opts="-Dsolr.host=$SOLR_HOST"
-java_opts="$java_opts -Dsolr.port=$SOLR_PORT"
-java_opts="$java_opts -Dzk.host=$ZK_HOST"
-java_opts="$java_opts -Dzk.port=$ZK_PORT"
 java_opts="$java_opts -Ddata.files.location=$BIOENTITIES"
 java_opts="$java_opts -Dexperiment.files.location=$EXPERIMENT_FILES"
+java_opts="$java_opts -Dexperiment.design.location=$EXPERIMENT_DESIGN_FILES"
 java_opts="$java_opts -Djdbc.url=$jdbc_url"
 java_opts="$java_opts -Djdbc.username=$jdbc_username"
 java_opts="$java_opts -Djdbc.password=$jdbc_password"
diff --git a/fixtures/generate-fixtures.sh b/fixtures/generate-fixtures.sh
index 840a621..dbd91f8 100755
--- a/fixtures/generate-fixtures.sh
+++ b/fixtures/generate-fixtures.sh
@@ -22,7 +22,7 @@
 
 # https://stackoverflow.com/questions/59895/how-can-i-get-the-source-directory-of-a-bash-script-from-within-the-script-itsel
 # https://stackoverflow.com/a/246128
-SCRIPT_DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )"
+SCRIPT_DIR="$( cd "$( dirname "${BASH_SOURCE[0]:-$0}" )" &> /dev/null && pwd )"
 
 export POSTGRES_HOST=${POSTGRES_HOST:-localhost}
 export POSTGRES_PORT=${POSTGRES_PORT:-5432}
diff --git a/fixtures/generate-tsv-fixture.sh b/fixtures/generate-tsv-fixture.sh
index e55bf4b..8bf89eb 100755
--- a/fixtures/generate-tsv-fixture.sh
+++ b/fixtures/generate-tsv-fixture.sh
@@ -10,7 +10,7 @@
 # We choose 100 genes that are expressed in those cells via analytics table
 
 set -e
-SCRIPT_DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )"
+SCRIPT_DIR="$( cd "$( dirname "${BASH_SOURCE[0]:-$0}" )" &> /dev/null && pwd )"
 
 source ${SCRIPT_DIR}/utils.sh
 
diff --git a/run_tests_with_containers.sh b/run_tests_with_containers.sh
index 4b47f41..f87f7a4 100755
--- a/run_tests_with_containers.sh
+++ b/run_tests_with_containers.sh
@@ -1,8 +1,5 @@
 #!/usr/bin/env bash
 
-export SOLR_HOST=my_solr:8983
-export ZK_HOST=gxa-zk-1
-export ZK_PORT=2181
 export POSTGRES_HOST=postgres
 export POSTGRES_DB=scxa-test
 export POSTGRES_USER=scxa
@@ -21,17 +18,17 @@ docker stop postgres && docker rm postgres
 docker network rm mynet
 docker network create mynet
 
-echo "Start ZK"
-docker run --rm --net mynet --name $ZK_HOST -d -p $ZK_PORT:$ZK_PORT -e ZOO_MY_ID=1 -e ZOO_SERVERS='server.1=0.0.0.0:2888:3888' -t zookeeper:3.5.8
+echo "Start ZooKeeper"
+docker run --rm --net mynet -d -p 2181:2181 -e ZOO_MY_ID=1 -e ZOO_SERVERS='server.1=0.0.0.0:2888:3888' -t zookeeper:3.8
 echo "Start Solr"
-docker run --rm --net mynet --name my_solr -d -p 8983:8983 -e ZK_HOST=$ZK_HOST:$ZK_PORT -t solr:7.7.1-alpine -DzkRun -Denable.runtime.lib=true -m 2g
+docker run --rm --net mynet -d -p 8983:8983 -t solr:8-slim -DzkRun -Denable.runtime.lib=true -m 2g
 
-echo "Start postgresql"
+echo "Start PostgreSQL"
 docker run --rm --name postgres --net mynet \
   -e POSTGRES_PASSWORD=$POSTGRES_PASSWORD \
   -e POSTGRES_USER=$POSTGRES_USER \
   -e POSTGRES_DB=$POSTGRES_DB \
-  -p $POSTGRES_PORT:$POSTGRES_PORT -d postgres:10-alpine3.15
+  -p $POSTGRES_PORT:$POSTGRES_PORT -d postgres:11-alpine3.17
 
 sleep 20
 
@@ -49,8 +46,6 @@ docker run --net mynet -i $docker_arch_line \
   -v $( pwd )/tests:/usr/local/tests:rw \
   -v $( pwd )/atlas-schemas:/atlas-schemas:rw \
   -v $( pwd )/bin:/usr/local/bin:rw \
-  -v $( pwd )/fixtures:/fixtures:rw \
-  -e SOLR_HOST=$SOLR_HOST -e ZK_HOST=$ZK_HOST -e ZK_PORT=$ZK_PORT \
   -e POSTGRES_USER=$POSTGRES_USER \
   -e POSTGRES_PASSWORD=$POSTGRES_PASSWORD \
   -e jdbc_username=$POSTGRES_USER \
diff --git a/fixtures/bioentity_properties/annotations/homo_sapiens.ensgene.tsv b/tests/bioentity_properties/annotations/homo_sapiens.ensgene.tsv
similarity index 100%
rename from fixtures/bioentity_properties/annotations/homo_sapiens.ensgene.tsv
rename to tests/bioentity_properties/annotations/homo_sapiens.ensgene.tsv
diff --git a/fixtures/bioentity_properties/array_designs/empty_file.txt b/tests/bioentity_properties/array_designs/empty_file.txt
similarity index 100%
rename from fixtures/bioentity_properties/array_designs/empty_file.txt
rename to tests/bioentity_properties/array_designs/empty_file.txt
diff --git a/fixtures/bioentity_properties/reactome/empty_file.txt b/tests/bioentity_properties/reactome/empty_file.txt
similarity index 100%
rename from fixtures/bioentity_properties/reactome/empty_file.txt
rename to tests/bioentity_properties/reactome/empty_file.txt
diff --git a/fixtures/experiment_files/expdesign/empty_file.txt b/tests/experiment_files/expdesign/empty_file.txt
similarity index 100%
rename from fixtures/experiment_files/expdesign/empty_file.txt
rename to tests/experiment_files/expdesign/empty_file.txt
diff --git a/tests/experiment_files/magetab/E-CURD-4/E-CURD-4.condensed-sdrf.tsv b/tests/experiment_files/magetab/E-CURD-4/E-CURD-4.condensed-sdrf.tsv
new file mode 100644
index 0000000..ca7576d
--- /dev/null
+++ b/tests/experiment_files/magetab/E-CURD-4/E-CURD-4.condensed-sdrf.tsv
@@ -0,0 +1,123 @@
+E-CURD-4		SRR8206654-CATTCAACCAAG	characteristic	age	5 day	
+E-CURD-4		SRR8206660-CCCTACCGTAGA	characteristic	age	5 day
+E-CURD-4		SRR8206654-TGGAATTTACGA	characteristic	age	5 day
+E-CURD-4		SRR8206654-CCCGCCAGGTAG	characteristic	age	5 day
+E-CURD-4		SRR8206654-ACGCTAGGGTTA	characteristic	age	5 day
+E-CURD-4		SRR8206656-TCCAATAGTGAT	characteristic	age	7 day
+E-CURD-4		SRR8206656-GCCCCTTTATTT	characteristic	age	7 day
+E-CURD-4		SRR8206656-TTTGTCGTGTGC	characteristic	age	7 day
+E-CURD-4		SRR8206656-ATCCGATATGCA	characteristic	age	7 day
+E-CURD-4		SRR8206656-GTGGCTCATTTG	characteristic	age	7 day
+E-CURD-4		SRR8206654-CATTCAACCAAG	characteristic	cell type	protoplast	http://purl.obolibrary.org/obo/CL_0000371
+E-CURD-4		SRR8206660-CCCTACCGTAGA	characteristic	cell type	protoplast	http://purl.obolibrary.org/obo/CL_0000371
+E-CURD-4		SRR8206654-TGGAATTTACGA	characteristic	cell type	protoplast	http://purl.obolibrary.org/obo/CL_0000371
+E-CURD-4		SRR8206654-CCCGCCAGGTAG	characteristic	cell type	protoplast	http://purl.obolibrary.org/obo/CL_0000371
+E-CURD-4		SRR8206654-ACGCTAGGGTTA	characteristic	cell type	protoplast	http://purl.obolibrary.org/obo/CL_0000371
+E-CURD-4		SRR8206656-TCCAATAGTGAT	characteristic	cell type	protoplast	http://purl.obolibrary.org/obo/CL_0000371
+E-CURD-4		SRR8206656-ATCCGATATGCA	characteristic	cell type	protoplast	http://purl.obolibrary.org/obo/CL_0000371
+E-CURD-4		SRR8206656-GTGGCTCATTTG	characteristic	cell type	protoplast	http://purl.obolibrary.org/obo/CL_0000371
+E-CURD-4		SRR8206656-TTTGTCGTGTGC	characteristic	cell type	protoplast	http://purl.obolibrary.org/obo/CL_0000371
+E-CURD-4		SRR8206656-GCCCCTTTATTT	characteristic	cell type	protoplast	http://purl.obolibrary.org/obo/CL_0000371
+E-CURD-4		SRR8206654-CATTCAACCAAG	characteristic	developmental stage	seedling	http://purl.obolibrary.org/obo/PO_0007131
+E-CURD-4		SRR8206660-CCCTACCGTAGA	characteristic	developmental stage	seedling	http://purl.obolibrary.org/obo/PO_0007131
+E-CURD-4		SRR8206654-TGGAATTTACGA	characteristic	developmental stage	seedling	http://purl.obolibrary.org/obo/PO_0007131
+E-CURD-4		SRR8206654-CCCGCCAGGTAG	characteristic	developmental stage	seedling	http://purl.obolibrary.org/obo/PO_0007131
+E-CURD-4		SRR8206654-ACGCTAGGGTTA	characteristic	developmental stage	seedling	http://purl.obolibrary.org/obo/PO_0007131
+E-CURD-4		SRR8206656-TCCAATAGTGAT	characteristic	developmental stage	seedling	http://purl.obolibrary.org/obo/PO_0007131
+E-CURD-4		SRR8206656-ATCCGATATGCA	characteristic	developmental stage	seedling	http://purl.obolibrary.org/obo/PO_0007131
+E-CURD-4		SRR8206656-GTGGCTCATTTG	characteristic	developmental stage	seedling	http://purl.obolibrary.org/obo/PO_0007131
+E-CURD-4		SRR8206656-TTTGTCGTGTGC	characteristic	developmental stage	seedling	http://purl.obolibrary.org/obo/PO_0007131
+E-CURD-4		SRR8206656-GCCCCTTTATTT	characteristic	developmental stage	seedling	http://purl.obolibrary.org/obo/PO_0007131
+E-CURD-4		SRR8206654-CATTCAACCAAG	characteristic	ecotype	Col-0	http://www.ebi.ac.uk/efo/EFO_0005148
+E-CURD-4		SRR8206660-CCCTACCGTAGA	characteristic	ecotype	Col-0	http://www.ebi.ac.uk/efo/EFO_0005148
+E-CURD-4		SRR8206654-TGGAATTTACGA	characteristic	ecotype	Col-0	http://www.ebi.ac.uk/efo/EFO_0005148
+E-CURD-4		SRR8206654-CCCGCCAGGTAG	characteristic	ecotype	Col-0	http://www.ebi.ac.uk/efo/EFO_0005148
+E-CURD-4		SRR8206654-ACGCTAGGGTTA	characteristic	ecotype	Col-0	http://www.ebi.ac.uk/efo/EFO_0005148
+E-CURD-4		SRR8206656-TCCAATAGTGAT	characteristic	ecotype	Col-0	http://www.ebi.ac.uk/efo/EFO_0005148
+E-CURD-4		SRR8206656-ATCCGATATGCA	characteristic	ecotype	Col-0	http://www.ebi.ac.uk/efo/EFO_0005148
+E-CURD-4		SRR8206656-GTGGCTCATTTG	characteristic	ecotype	Col-0	http://www.ebi.ac.uk/efo/EFO_0005148
+E-CURD-4		SRR8206656-TTTGTCGTGTGC	characteristic	ecotype	Col-0	http://www.ebi.ac.uk/efo/EFO_0005148
+E-CURD-4		SRR8206656-GCCCCTTTATTT	characteristic	ecotype	Col-0	http://www.ebi.ac.uk/efo/EFO_0005148
+E-CURD-4		SRR8206654-CATTCAACCAAG	characteristic	genotype	wild type genotype
+E-CURD-4		SRR8206660-CCCTACCGTAGA	characteristic	genotype	wild type genotype
+E-CURD-4		SRR8206654-TGGAATTTACGA	characteristic	genotype	wild type genotype
+E-CURD-4		SRR8206654-CCCGCCAGGTAG	characteristic	genotype	wild type genotype
+E-CURD-4		SRR8206654-ACGCTAGGGTTA	characteristic	genotype	wild type genotype
+E-CURD-4		SRR8206656-TCCAATAGTGAT	characteristic	genotype	wild type genotype
+E-CURD-4		SRR8206656-ATCCGATATGCA	characteristic	genotype	wild type genotype
+E-CURD-4		SRR8206656-GTGGCTCATTTG	characteristic	genotype	wild type genotype
+E-CURD-4		SRR8206656-TTTGTCGTGTGC	characteristic	genotype	wild type genotype
+E-CURD-4		SRR8206656-GCCCCTTTATTT	characteristic	genotype	wild type genotype
+E-CURD-4		SRR8206654-CATTCAACCAAG	characteristic	growth condition	long day length regimen	http://purl.obolibrary.org/obo/EO_0007199
+E-CURD-4		SRR8206660-CCCTACCGTAGA	characteristic	growth condition	long day length regimen	http://purl.obolibrary.org/obo/EO_0007199
+E-CURD-4		SRR8206654-TGGAATTTACGA	characteristic	growth condition	long day length regimen	http://purl.obolibrary.org/obo/EO_0007199
+E-CURD-4		SRR8206654-CCCGCCAGGTAG	characteristic	growth condition	long day length regimen	http://purl.obolibrary.org/obo/EO_0007199
+E-CURD-4		SRR8206654-ACGCTAGGGTTA	characteristic	growth condition	long day length regimen	http://purl.obolibrary.org/obo/EO_0007199
+E-CURD-4		SRR8206656-TCCAATAGTGAT	characteristic	growth condition	long day length regimen	http://purl.obolibrary.org/obo/EO_0007199
+E-CURD-4		SRR8206656-ATCCGATATGCA	characteristic	growth condition	long day length regimen	http://purl.obolibrary.org/obo/EO_0007199
+E-CURD-4		SRR8206656-GTGGCTCATTTG	characteristic	growth condition	long day length regimen	http://purl.obolibrary.org/obo/EO_0007199
+E-CURD-4		SRR8206656-TTTGTCGTGTGC	characteristic	growth condition	long day length regimen	http://purl.obolibrary.org/obo/EO_0007199
+E-CURD-4		SRR8206656-GCCCCTTTATTT	characteristic	growth condition	long day length regimen	http://purl.obolibrary.org/obo/EO_0007199
+E-CURD-4		SRR8206654-CATTCAACCAAG	characteristic	organism	Arabidopsis thaliana	http://purl.obolibrary.org/obo/NCBITaxon_3702
+E-CURD-4		SRR8206660-CCCTACCGTAGA	characteristic	organism	Arabidopsis thaliana	http://purl.obolibrary.org/obo/NCBITaxon_3702
+E-CURD-4		SRR8206654-TGGAATTTACGA	characteristic	organism	Arabidopsis thaliana	http://purl.obolibrary.org/obo/NCBITaxon_3702
+E-CURD-4		SRR8206654-CCCGCCAGGTAG	characteristic	organism	Arabidopsis thaliana	http://purl.obolibrary.org/obo/NCBITaxon_3702
+E-CURD-4		SRR8206654-ACGCTAGGGTTA	characteristic	organism	Arabidopsis thaliana	http://purl.obolibrary.org/obo/NCBITaxon_3702
+E-CURD-4		SRR8206656-TCCAATAGTGAT	characteristic	organism	Arabidopsis thaliana	http://purl.obolibrary.org/obo/NCBITaxon_3702
+E-CURD-4		SRR8206656-ATCCGATATGCA	characteristic	organism	Arabidopsis thaliana	http://purl.obolibrary.org/obo/NCBITaxon_3702
+E-CURD-4		SRR8206656-GTGGCTCATTTG	characteristic	organism	Arabidopsis thaliana	http://purl.obolibrary.org/obo/NCBITaxon_3702
+E-CURD-4		SRR8206656-TTTGTCGTGTGC	characteristic	organism	Arabidopsis thaliana	http://purl.obolibrary.org/obo/NCBITaxon_3702
+E-CURD-4		SRR8206656-GCCCCTTTATTT	characteristic	organism	Arabidopsis thaliana	http://purl.obolibrary.org/obo/NCBITaxon_3702
+E-CURD-4		SRR8206654-CATTCAACCAAG	characteristic	organism part	root	http://purl.obolibrary.org/obo/PO_0009005
+E-CURD-4		SRR8206660-CCCTACCGTAGA	characteristic	organism part	root	http://purl.obolibrary.org/obo/PO_0009005
+E-CURD-4		SRR8206654-TGGAATTTACGA	characteristic	organism part	root	http://purl.obolibrary.org/obo/PO_0009005
+E-CURD-4		SRR8206654-CCCGCCAGGTAG	characteristic	organism part	root	http://purl.obolibrary.org/obo/PO_0009005
+E-CURD-4		SRR8206654-ACGCTAGGGTTA	characteristic	organism part	root	http://purl.obolibrary.org/obo/PO_0009005
+E-CURD-4		SRR8206656-TCCAATAGTGAT	characteristic	organism part	root	http://purl.obolibrary.org/obo/PO_0009005
+E-CURD-4		SRR8206656-ATCCGATATGCA	characteristic	organism part	root	http://purl.obolibrary.org/obo/PO_0009005
+E-CURD-4		SRR8206656-GTGGCTCATTTG	characteristic	organism part	root	http://purl.obolibrary.org/obo/PO_0009005
+E-CURD-4		SRR8206656-TTTGTCGTGTGC	characteristic	organism part	root	http://purl.obolibrary.org/obo/PO_0009005
+E-CURD-4		SRR8206656-GCCCCTTTATTT	characteristic	organism part	root	http://purl.obolibrary.org/obo/PO_0009005
+E-CURD-4		SRR8206654-CATTCAACCAAG	characteristic	single cell quality	OK
+E-CURD-4		SRR8206660-CCCTACCGTAGA	characteristic	single cell quality	OK
+E-CURD-4		SRR8206654-TGGAATTTACGA	characteristic	single cell quality	OK
+E-CURD-4		SRR8206654-CCCGCCAGGTAG	characteristic	single cell quality	OK
+E-CURD-4		SRR8206654-ACGCTAGGGTTA	characteristic	single cell quality	OK
+E-CURD-4		SRR8206656-TCCAATAGTGAT	characteristic	single cell quality	OK
+E-CURD-4		SRR8206656-ATCCGATATGCA	characteristic	single cell quality	OK
+E-CURD-4		SRR8206656-GTGGCTCATTTG	characteristic	single cell quality	OK
+E-CURD-4		SRR8206656-TTTGTCGTGTGC	characteristic	single cell quality	OK
+E-CURD-4		SRR8206656-GCCCCTTTATTT	characteristic	single cell quality	OK
+E-CURD-4		SRR8206654-CATTCAACCAAG	characteristic	stimulus	sucrose	http://purl.obolibrary.org/obo/CHEBI_17992
+E-CURD-4		SRR8206660-CCCTACCGTAGA	characteristic	stimulus	none	http://www.ebi.ac.uk/efo/EFO_0001461
+E-CURD-4		SRR8206654-TGGAATTTACGA	characteristic	stimulus	sucrose	http://purl.obolibrary.org/obo/CHEBI_17992
+E-CURD-4		SRR8206654-CCCGCCAGGTAG	characteristic	stimulus	sucrose	http://purl.obolibrary.org/obo/CHEBI_17992
+E-CURD-4		SRR8206654-ACGCTAGGGTTA	characteristic	stimulus	sucrose	http://purl.obolibrary.org/obo/CHEBI_17992
+E-CURD-4		SRR8206656-TCCAATAGTGAT	characteristic	stimulus	sucrose	http://purl.obolibrary.org/obo/CHEBI_17992
+E-CURD-4		SRR8206656-ATCCGATATGCA	characteristic	stimulus	sucrose	http://purl.obolibrary.org/obo/CHEBI_17992
+E-CURD-4		SRR8206656-GTGGCTCATTTG	characteristic	stimulus	sucrose	http://purl.obolibrary.org/obo/CHEBI_17992
+E-CURD-4		SRR8206656-TTTGTCGTGTGC	characteristic	stimulus	sucrose	http://purl.obolibrary.org/obo/CHEBI_17992
+E-CURD-4		SRR8206656-GCCCCTTTATTT	characteristic	stimulus	sucrose	http://purl.obolibrary.org/obo/CHEBI_17992
+E-CURD-4		SRR8206654-CATTCAACCAAG	factor	age	5 day
+E-CURD-4		SRR8206660-CCCTACCGTAGA	factor	age	5 day
+E-CURD-4		SRR8206654-TGGAATTTACGA	factor	age	5 day
+E-CURD-4		SRR8206654-CCCGCCAGGTAG	factor	age	5 day
+E-CURD-4		SRR8206656-TCCAATAGTGAT	factor	age	7 day
+E-CURD-4		SRR8206656-ATCCGATATGCA	factor	age	7 day
+E-CURD-4		SRR8206656-GTGGCTCATTTG	factor	age	7 day
+E-CURD-4		SRR8206656-TTTGTCGTGTGC	factor	age	7 day
+E-CURD-4		SRR8206656-GCCCCTTTATTT	factor	age	7 day
+E-CURD-4		SRR8206654-CATTCAACCAAG	factor	stimulus	sucrose	http://purl.obolibrary.org/obo/CHEBI_17992
+E-CURD-4		SRR8206660-CCCTACCGTAGA	factor	stimulus	none	http://www.ebi.ac.uk/efo/EFO_0001461
+E-CURD-4		SRR8206654-CCCGCCAGGTAG	factor	stimulus	sucrose	http://purl.obolibrary.org/obo/CHEBI_17992
+E-CURD-4		SRR8206654-ACGCTAGGGTTA	factor	stimulus	sucrose	http://purl.obolibrary.org/obo/CHEBI_17992
+E-CURD-4		SRR8206656-TCCAATAGTGAT	factor	stimulus	sucrose	http://purl.obolibrary.org/obo/CHEBI_17992
+E-CURD-4		SRR8206656-ATCCGATATGCA	factor	stimulus	sucrose	http://purl.obolibrary.org/obo/CHEBI_17992
+E-CURD-4		SRR8206656-GTGGCTCATTTG	factor	stimulus	sucrose	http://purl.obolibrary.org/obo/CHEBI_17992
+E-CURD-4		SRR8206656-TTTGTCGTGTGC	factor	stimulus	sucrose	http://purl.obolibrary.org/obo/CHEBI_17992
+E-CURD-4		SRR8206656-GCCCCTTTATTT	factor	stimulus	sucrose	http://purl.obolibrary.org/obo/CHEBI_17992
+E-CURD-4		SRR8206654-CATTCAACCAAG	factor	inferred cell type - authors labels	columella root cap cell 6	http://purl.obolibrary.org/obo/PO_0020132
+E-CURD-4		SRR8206660-CCCTACCGTAGA	factor	inferred cell type - authors labels	root endodermis 12	http://purl.obolibrary.org/obo/PO_0005059
+E-CURD-4		SRR8206654-TGGAATTTACGA	factor	inferred cell type - authors labels	columella root cap cell 5	http://purl.obolibrary.org/obo/PO_0020132
+E-CURD-4		SRR8206654-CCCGCCAGGTAG	factor	inferred cell type - authors labels	non-hair root epidermal cell 2	http://purl.obolibrary.org/obo/PO_0000263
+E-CURD-4		SRR8206656-GCCCCTTTATTT	factor	inferred cell type - authors labels	trichoblast 17	http://purl.obolibrary.org/obo/PO_0000262
diff --git a/tests/experiment_files/magetab/E-CURD-4/E-CURD-4.idf.txt b/tests/experiment_files/magetab/E-CURD-4/E-CURD-4.idf.txt
new file mode 100644
index 0000000..0a0618a
--- /dev/null
+++ b/tests/experiment_files/magetab/E-CURD-4/E-CURD-4.idf.txt
@@ -0,0 +1,41 @@
+MAGE-TAB Version	1.1										
+Investigation Title	High-throughput single-cell transcriptome profiling of plant cell types - single cell dataset										
+Experiment Description	Single-cell transcriptome analysis of heterogeneous tissues can provide high-resolution windows into the spatiotemporal dynamics of developmental processes and environmental responses. Here we use the high-hroughput Drop-seq approach to profile the transcriptomes of over 12,000 individual cells from the Arabidopsis root. We identify marker genes for a diversity of cell types, capture cell-type frequency and gene expression alterations in response to sucrose, and illuminate the transcriptome changes that occur across endodermis development. Single-cell transcriptomes were captured from over 12,000 cells, across 10 drop-seq runs (6 independent protoplast preparations)										
+Public Release Date	2019-05-13										
+Experimental Factor Name	age	stimulus									
+Experimental Factor Type	age	stimulus									
+Term Source Name	ArrayExpress										
+Term Source File	http://www.ebi.ac.uk/arrayexpress/										
+Person Last Name	Shulse	Cole	Ciobanu	Lin	Yoshinaga	Gouran	Turco	Zhu	O’Malley	Brady	Dickel
+Person First Name	Christine	Benjamin	Doina	Junyan	Yuko	Mona	Gina	Yiwen	Ronan	Siobhan	Diane
+Person Mid Initials	N	J					M		C	M	E
+Person Email	geo@ncbi.nlm.nih.gov										
+Person Affiliation	DOE-Joint Genome Institute										
+Person Address	DOE-Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA, USA										
+Person Roles	submitter										
+											
+Protocol Name	P-GSE122687-1	P-GSE122687-5	P-GSE122687-8	P-GSE122687-9	P-GSE122687-4	P-GSE122687-6	P-GSE122687-3	P-GSE122687-7	P-GSE122687-2		
+Protocol Type	sample treatment protocol	sample treatment protocol	nucleic acid library construction protocol	nucleic acid library construction protocol	nucleic acid library construction protocol	nucleic acid library construction protocol	nucleic acid library construction protocol	growth protocol	growth protocol		
+Protocol Description	Protoplast suspensions were prepared from 5-day-old Arabidopsis seedlings using previously described methods (PMID: 16170893). Briefly, whole Arabidopsis roots were finely chopped with a Feather Disposable Scalpel #10 (Andwin Scientific, Schaumburg, IL) and distributed among 70-μm cell strainers (each containing 1,250-1,500 roots). Blades were changed every 5 to 6 plates to prevent dulling of the blade and consequent bruising of the tissue. Each strainer was then immersed in a solution of cellulysin (MilliporeSigma) and pectolyase (MilliporeSigma) for 60 minutes with agitation at 85 rpm on an orbital shaker at room temperature. After cell wall digestion, each strainer, containing remnants of roots that were not protoplasted, was removed and discarded. Protoplasts were then pelleted, resuspended, and filtered through a 40-μm cell strainer to eliminate any clumped cells.  Libraries A and B are technical replicates made from the same protoplast preparation. Libraries F and G, and libraries I and J, respectively, are separate protoplast preparations made from the same seedling events. Otherwise, all libraries are independent biological samples	Protoplast suspensions were prepared from 7-day-old Arabidopsis seedlings using previously described methods (PMID: 16170893). Briefly, whole Arabidopsis roots were finely chopped with a Feather Disposable Scalpel #10 (Andwin Scientific, Schaumburg, IL) and distributed among 70-μm cell strainers (each containing 1,250-1,500 roots). Blades were changed every 5 to 6 plates to prevent dulling of the blade and consequent bruising of the tissue. Each strainer was then immersed in a solution of cellulysin (MilliporeSigma) and pectolyase (MilliporeSigma) for 60 minutes with agitation at 85 rpm on an orbital shaker at room temperature. After cell wall digestion, each strainer, containing remnants of roots that were not protoplasted, was removed and discarded. Protoplasts were then pelleted, resuspended, and filtered through a 40-μm cell strainer to eliminate any clumped cells. Libraries A and B are technical replicates made from the same protoplast preparation. Libraries F and G, and libraries I and J, respectively, are separate protoplast preparations made from the same seedling events. Otherwise, all libraries are independent biological samples	Cells were diluted in Solution A (PMID: 16170893) to 100 cells/ul. 10% mouse embryonic cells were added to each suspension. Single-cell suspensions were processed through Drop-Seq to generate single-cell cDNA libraries attached to microbeads as previously described (PMID: 26000488). The library was prepared according to Drop-seq Laboratory Protocol version 3.1 (http://mccarrolllab.com/dropseq/) using Illumina's Nextera XT DNA Library Preparation Kit. The library was uniquely indexed and then pooled and sequenced on a single lane of a NextSeq instrument (Illumina)	Total RNA was isolated from flash frozen 5-day-old Arabidopsis root material using the Qiagen RNeasy kit (Carlsbad, CA). An RNA library was prepared for sequencing using the TruSeq Stranded mRNA Library Prep Kit (Illumina, RS-122-2101) according to the manufacturer’s Low Sample (LS) Protocol.manufacturer’s Low Sample (LS) Protocol.	Cells were used at their starting concentration after protoplasting. 2.5% human cells were added to each suspension. Single-cell suspensions were processed through Drop-Seq to generate single-cell cDNA libraries attached to microbeads as previously described (PMID: 26000488). The library was prepared according to Drop-seq Laboratory Protocol version 3.1 (http://mccarrolllab.com/dropseq/) using Illumina's Nextera XT DNA Library Preparation Kit. The library was uniquely indexed and then pooled and sequenced on a single lane of a HiSeq 4000.	Cells were used at their starting concentration after protoplasting. 2.5% human cells were added to each suspension. Single-cell suspensions were processed through Drop-Seq to generate single-cell cDNA libraries attached to microbeads as previously described (PMID: 26000488). The library was prepared according to Drop-seq Laboratory Protocol version 3.1 (http://mccarrolllab.com/dropseq/) using Illumina's Nextera XT DNA Library Preparation Kit. The library was uniquely indexed and then sequenced on a single lane of a HiSeq 2500.	Cells were diluted in Solution A (PMID: 16170893) to 96 cells/ul. 2.5% human cells were added to each suspension. Single-cell suspensions were processed through Drop-Seq to generate single-cell cDNA libraries attached to microbeads as previously described (PMID: 26000488). The library was prepared according to Drop-seq Laboratory Protocol version 3.1 (http://mccarrolllab.com/dropseq/) using Illumina's Nextera XT DNA Library Preparation Kit. The library was uniquely indexed and then pooled and sequenced on a single lane of a HiSeq 4000.	Seeds were sown at a density of ~125 seeds per row on sterile nylon mesh filters placed on top of plant growth media consisting of 1X Murashige and Skoog Basal Medium (Sigma-Aldrich, St. Louis, MO), 1% agar (Sigma-Aldrich), 2.6 mM 2-(N-Morpholino)ethanesulfonic acid (MES; Sigma-Aldrich), with no sucrose added, and adjusted to pH 5.7. Petri dishes were positioned vertically in an incubator (Percival Scientific, Perry, IA) under a long-day photoperiod (16 h of light) at 22°C.	Seeds were sown at a density of ~125 seeds per row on sterile nylon mesh filters placed on top of plant growth media consisting of 1X Murashige and Skoog Basal Medium (Sigma-Aldrich, St. Louis, MO) supplemented with 1% sucrose (Sigma-Aldrich), 1% agar (Sigma-Aldrich), 2.6 mM 2-(N-Morpholino)ethanesulfonic acid (MES; Sigma-Aldrich), and adjusted to pH 5.7. Petri dishes were positioned vertically in an incubator (Percival Scientific, Perry, IA) under a long-day photoperiod (16 h of light) at 22°C.		
+											
+Comment[SecondaryAccession]	GSE122687	SRP169576									
+Comment[ExpressionAtlasAccession]	E-CURD-4										
+Comment[GEOReleaseDate]	2019-05-13										
+Comment[ArrayExpressSubmissionDate]	2018-11-19										
+Comment[GEOLastUpdateDate]	2019-05-16										
+Comment[AEExperimentType]	RNA-seq of coding RNA from single cells										
+Comment[RelatedExperiment]	E-GEOD-116614										
+SDRF File	E-CURD-4.sdrf.txt										
+											
+											
+PubMed ID	31091459										
+Publication DOI	10.1016/j.celrep.2019.04.054										
+Publication Author List	Christine N.Shulse, Benjamin J.Cole, Doina Ciobanu, Junyan Lin, Yuko Yoshinaga, Mona Gouran, Gina M.Turco, Yiwen Zhu, Ronan C.O’Malley, Siobhan M.Brady, Diane E.Dickel										
+Publication Title	High-Throughput Single-Cell Transcriptome Profiling of Plant Cell Types										
+Publication Status	published										
+Publication Status Term Source REF											
+Publication Status Term Accession Number											
+											
+Comment[EAExpectedClusters]	17										
+Comment[EAExperimentType]	baseline	trajectory									
+Comment[EACurator]	Nancy George										
diff --git a/tests/experiment_files/magetab/E-CURD-4/E-CURD-4.sdrf.txt b/tests/experiment_files/magetab/E-CURD-4/E-CURD-4.sdrf.txt
new file mode 100644
index 0000000..7a9a2d6
--- /dev/null
+++ b/tests/experiment_files/magetab/E-CURD-4/E-CURD-4.sdrf.txt
@@ -0,0 +1,5 @@
+Source Name	Comment[Sample_source_name]	Comment[Sample_title]	Characteristics[organism]	Characteristics[age]	Unit[time unit]	Characteristics[ecotype]	Characteristics[developmental stage]	Characteristics[growth condition]	Characteristics[stimulus]	Characteristics[genotype]	Characteristics[organism part]	Characteristics[cell type]	Comment[cell count]	Characteristics[single cell quality]	Material Type	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Extract Name	Comment[BioSD_SAMPLE]	Comment[INSTRUMENT_MODEL]	Comment[LIBRARY_SELECTION]	Comment[LIBRARY_LAYOUT]	Comment[LIBRARY_SOURCE]	Comment[LIBRARY_STRATEGY]	Comment[LIBRARY_STRAND]	Comment[end bias]	Comment[input molecule]	Comment[library construction]	Comment[primer]	Comment[single cell isolation]	Comment[cdna read]	Comment[cdna read offset]	Comment[cdna read size]	Comment[cell barcode offset]	Comment[cell barcode read]	Comment[cell barcode size]	Comment[umi barcode offset]	Comment[umi barcode read]	Comment[umi barcode size]	Material Type	Assay Name	Comment[ENA_EXPERIMENT]	Comment[Platform_title]	Technology Type	Scan Name	Comment[ENA_RUN]	Comment[read1 file]	Comment[FASTQ_URI]	Comment[read2 file]	Comment[FASTQ_URI]	Factor Value[age]	Unit[time unit]	Factor Value[stimulus]
+GSM3478124 1	SRS4057433	Arabidopsis_root_Drop-seq_replicate_A	Arabidopsis thaliana	5	day	Col-0	seedling	long day length regimen	sucrose	wild type genotype	root	protoplast	2195	OK	cell	P-GSE122687-2	ArrayExpress	P-GSE122687-3	ArrayExpress			GSM3478124 extract 1	SAMN10440994	Illumina HiSeq 4000	cDNA	PAIRED	TRANSCRIPTOMIC SINGLE CELL	RNA-Seq	not applicable	3 prime tag	polyA RNA	Drop-seq	oligo-dT	Drop-seq	read2	0	50	0	read1	12	12	read1	8	polyA RNA	GSM3478124	SRX5025979	Illumina HiSeq 4000 (Arabidopsis thaliana)	sequencing assay	SRR8206654	SRR8206654	SRR8206654_1.fastq.gz	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR820/004/SRR8206654/SRR8206654_1.fastq.gz	SRR8206654_2.fastq.gz	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR820/004/SRR8206654/SRR8206654_2.fastq.gz	5	day	sucrose
+GSM3478130 1	SRS4057439	Arabidopsis_root_Drop-seq_replicate_G	Arabidopsis thaliana	5	day	Col-0	seedling	long day length regimen	none	wild type genotype	root	protoplast	430	OK	cell	P-GSE122687-1	ArrayExpress	P-GSE122687-7	ArrayExpress	P-GSE122687-8	ArrayExpress	GSM3478130 extract 1	SAMN10440988	Illumina NextSeq 500	cDNA	PAIRED	TRANSCRIPTOMIC SINGLE CELL	RNA-Seq	not applicable	3 prime tag	polyA RNA	Drop-seq	oligo-dT	Drop-seq	read2	0	50	0	read1	12	12	read1	8	polyA RNA	GSM3478130	SRX5025985	Illumina NextSeq 500 (Arabidopsis thaliana)	sequencing assay	SRR8206660	SRR8206660	SRR8206660_1.fastq.gz	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR820/000/SRR8206660/SRR8206660_1.fastq.gz	SRR8206660_2.fastq.gz	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR820/000/SRR8206660/SRR8206660_2.fastq.gz	5	day	none
+GSM3478126 1	SRS4057435	Arabidopsis_root_Drop-seq_replicate_C	Arabidopsis thaliana	7	day	Col-0	seedling	long day length regimen	sucrose	wild type genotype	root	protoplast	2056	OK	cell	P-GSE122687-5	ArrayExpress	P-GSE122687-6	ArrayExpress	P-GSE122687-2	ArrayExpress	GSM3478126 extract 1	SAMN10440992	Illumina HiSeq 2500	cDNA	PAIRED	TRANSCRIPTOMIC SINGLE CELL	RNA-Seq	not applicable	3 prime tag	polyA RNA	Drop-seq	oligo-dT	Drop-seq	read2	0	50	0	read1	12	12	read1	8	polyA RNA	GSM3478126	SRX5025981	Illumina HiSeq 2500 (Arabidopsis thaliana)	sequencing assay	SRR8206656	SRR8206656	SRR8206656_1.fastq.gz	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR820/006/SRR8206656/SRR8206656_1.fastq.gz	SRR8206656_2.fastq.gz	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR820/006/SRR8206656/SRR8206656_2.fastq.gz	7	day	sucrose
+GSM3478126 1	SRS4057435	Arabidopsis_root_Drop-seq_replicate_C	Arabidopsis thaliana	7	day	Col-0	seedling	long day length regimen	sucrose	wild type genotype	root	protoplast	2056	OK	cell	P-GSE122687-5	ArrayExpress	P-GSE122687-6	ArrayExpress	P-GSE122687-2	ArrayExpress	GSM3478126 extract 1	SAMN10440992	Illumina HiSeq 2500	cDNA	PAIRED	TRANSCRIPTOMIC SINGLE CELL	RNA-Seq	not applicable	3 prime tag	polyA RNA	Drop-seq	oligo-dT	Drop-seq	read2	0	50	0	read1	12	12	read1	8	polyA RNA	GSM3478126	SRX5025981	Illumina HiSeq 2500 (Arabidopsis thaliana)	sequencing assay	SRR8206656	SRR8206656	SRR8206656_1.fastq.gz	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR820/006/SRR8206656/SRR8206656_1.fastq.gz	SRR8206656_2.fastq.gz	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR820/006/SRR8206656/SRR8206656_2.fastq.gz	7	day	sucrose
diff --git a/fixtures/experiment_files/magetab/E-MTAB-2983/E-MTAB-2983.condensed-sdrf.tsv b/tests/experiment_files/magetab/E-MTAB-2983/E-MTAB-2983.condensed-sdrf.tsv
similarity index 83%
rename from fixtures/experiment_files/magetab/E-MTAB-2983/E-MTAB-2983.condensed-sdrf.tsv
rename to tests/experiment_files/magetab/E-MTAB-2983/E-MTAB-2983.condensed-sdrf.tsv
index 0dd9617..049ac22 100644
--- a/fixtures/experiment_files/magetab/E-MTAB-2983/E-MTAB-2983.condensed-sdrf.tsv
+++ b/tests/experiment_files/magetab/E-MTAB-2983/E-MTAB-2983.condensed-sdrf.tsv
@@ -7,7 +7,10 @@ E-MTAB-2983		ERR647946	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647946	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647946	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647946	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647946	factor	single cell identifier	24	
+E-MTAB-2983		ERR647946	factor	single cell identifier	24
+E-MTAB-2983		ERR647946	factor	skin	24
+E-MTAB-2983		ERR647946	factor	age	24
+E-MTAB-2983		ERR647946	factor	bala	24
 E-MTAB-2983		ERR647947	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647947	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647947	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -17,7 +20,10 @@ E-MTAB-2983		ERR647947	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647947	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647947	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647947	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647947	factor	single cell identifier	5	
+E-MTAB-2983		ERR647947	factor	single cell identifier	5
+E-MTAB-2983		ERR647947	factor	skin	5
+E-MTAB-2983		ERR647947	factor	age	5
+E-MTAB-2983		ERR647947	factor	bala	5
 E-MTAB-2983		ERR647948	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647948	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647948	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -27,7 +33,10 @@ E-MTAB-2983		ERR647948	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647948	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647948	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647948	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647948	factor	single cell identifier	27	
+E-MTAB-2983		ERR647948	factor	single cell identifier	27
+E-MTAB-2983		ERR647948	factor	skin	27
+E-MTAB-2983		ERR647948	factor	age	27
+E-MTAB-2983		ERR647948	factor	bala	27
 E-MTAB-2983		ERR647949	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647949	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647949	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -37,7 +46,10 @@ E-MTAB-2983		ERR647949	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647949	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647949	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647949	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647949	factor	single cell identifier	20	
+E-MTAB-2983		ERR647949	factor	single cell identifier	20
+E-MTAB-2983		ERR647949	factor	skin	20
+E-MTAB-2983		ERR647949	factor	age	20
+E-MTAB-2983		ERR647949	factor	bala	20
 E-MTAB-2983		ERR647950	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647950	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647950	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -47,7 +59,10 @@ E-MTAB-2983		ERR647950	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647950	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647950	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647950	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647950	factor	single cell identifier	17	
+E-MTAB-2983		ERR647950	factor	single cell identifier	17
+E-MTAB-2983		ERR647950	factor	skin	17
+E-MTAB-2983		ERR647950	factor	age	17
+E-MTAB-2983		ERR647950	factor	bala	17
 E-MTAB-2983		ERR647951	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647951	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647951	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -57,7 +72,10 @@ E-MTAB-2983		ERR647951	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647951	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647951	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647951	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647951	factor	single cell identifier	2	
+E-MTAB-2983		ERR647951	factor	single cell identifier	2
+E-MTAB-2983		ERR647951	factor	skin	2
+E-MTAB-2983		ERR647951	factor	age	2
+E-MTAB-2983		ERR647951	factor	bala	2
 E-MTAB-2983		ERR647952	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647952	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647952	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -67,7 +85,10 @@ E-MTAB-2983		ERR647952	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647952	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647952	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647952	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647952	factor	single cell identifier	13	
+E-MTAB-2983		ERR647952	factor	single cell identifier	13
+E-MTAB-2983		ERR647952	factor	skin	13
+E-MTAB-2983		ERR647952	factor	age	13
+E-MTAB-2983		ERR647952	factor	bala	13
 E-MTAB-2983		ERR647953	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647953	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647953	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -77,7 +98,10 @@ E-MTAB-2983		ERR647953	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647953	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647953	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647953	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647953	factor	single cell identifier	28	
+E-MTAB-2983		ERR647953	factor	single cell identifier	28
+E-MTAB-2983		ERR647953	factor	skin	28
+E-MTAB-2983		ERR647953	factor	age	28
+E-MTAB-2983		ERR647953	factor	bala	28
 E-MTAB-2983		ERR647954	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647954	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647954	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -87,7 +111,10 @@ E-MTAB-2983		ERR647954	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647954	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647954	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647954	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647954	factor	single cell identifier	23	
+E-MTAB-2983		ERR647954	factor	single cell identifier	23
+E-MTAB-2983		ERR647954	factor	skin	23
+E-MTAB-2983		ERR647954	factor	age	23
+E-MTAB-2983		ERR647954	factor	bala	23
 E-MTAB-2983		ERR647955	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647955	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647955	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -97,7 +124,10 @@ E-MTAB-2983		ERR647955	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647955	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647955	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647955	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647955	factor	single cell identifier	19	
+E-MTAB-2983		ERR647955	factor	single cell identifier	19
+E-MTAB-2983		ERR647955	factor	skin	19
+E-MTAB-2983		ERR647955	factor	age	19
+E-MTAB-2983		ERR647955	factor	bala	19
 E-MTAB-2983		ERR647956	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647956	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647956	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -107,7 +137,10 @@ E-MTAB-2983		ERR647956	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647956	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647956	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647956	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647956	factor	single cell identifier	38	
+E-MTAB-2983		ERR647956	factor	single cell identifier	38
+E-MTAB-2983		ERR647956	factor	skin	38
+E-MTAB-2983		ERR647956	factor	age	38
+E-MTAB-2983		ERR647956	factor	bala	38
 E-MTAB-2983		ERR647957	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647957	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647957	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -117,7 +150,10 @@ E-MTAB-2983		ERR647957	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647957	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647957	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647957	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647957	factor	single cell identifier	12	
+E-MTAB-2983		ERR647957	factor	single cell identifier	12
+E-MTAB-2983		ERR647957	factor	skin	12
+E-MTAB-2983		ERR647957	factor	age	12
+E-MTAB-2983		ERR647957	factor	bala	12
 E-MTAB-2983		ERR647958	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647958	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647958	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -127,7 +163,10 @@ E-MTAB-2983		ERR647958	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647958	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647958	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647958	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647958	factor	single cell identifier	26	
+E-MTAB-2983		ERR647958	factor	single cell identifier	26
+E-MTAB-2983		ERR647958	factor	skin	26
+E-MTAB-2983		ERR647958	factor	age	26
+E-MTAB-2983		ERR647958	factor	bala	26
 E-MTAB-2983		ERR647959	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647959	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647959	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -137,7 +176,10 @@ E-MTAB-2983		ERR647959	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647959	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647959	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647959	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647959	factor	single cell identifier	37	
+E-MTAB-2983		ERR647959	factor	single cell identifier	37
+E-MTAB-2983		ERR647959	factor	skin	37
+E-MTAB-2983		ERR647959	factor	age	37
+E-MTAB-2983		ERR647959	factor	bala	37
 E-MTAB-2983		ERR647960	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647960	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647960	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -147,7 +189,10 @@ E-MTAB-2983		ERR647960	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647960	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647960	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647960	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647960	factor	single cell identifier	18	
+E-MTAB-2983		ERR647960	factor	single cell identifier	18
+E-MTAB-2983		ERR647960	factor	skin	18
+E-MTAB-2983		ERR647960	factor	age	18
+E-MTAB-2983		ERR647960	factor	bala	18
 E-MTAB-2983		ERR647961	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647961	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647961	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -157,7 +202,10 @@ E-MTAB-2983		ERR647961	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647961	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647961	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647961	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647961	factor	single cell identifier	29	
+E-MTAB-2983		ERR647961	factor	single cell identifier	29
+E-MTAB-2983		ERR647961	factor	skin	29
+E-MTAB-2983		ERR647961	factor	age	29
+E-MTAB-2983		ERR647961	factor	bala	29
 E-MTAB-2983		ERR647962	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647962	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647962	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -167,7 +215,10 @@ E-MTAB-2983		ERR647962	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647962	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647962	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647962	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647962	factor	single cell identifier	36	
+E-MTAB-2983		ERR647962	factor	single cell identifier	36
+E-MTAB-2983		ERR647962	factor	skin	36
+E-MTAB-2983		ERR647962	factor	age	36
+E-MTAB-2983		ERR647962	factor	bala	36
 E-MTAB-2983		ERR647963	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647963	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647963	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -177,7 +228,10 @@ E-MTAB-2983		ERR647963	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647963	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647963	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647963	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647963	factor	single cell identifier	9	
+E-MTAB-2983		ERR647963	factor	single cell identifier	9
+E-MTAB-2983		ERR647963	factor	skin	9
+E-MTAB-2983		ERR647963	factor	age	9
+E-MTAB-2983		ERR647963	factor	bala	9
 E-MTAB-2983		ERR647964	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647964	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647964	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -187,7 +241,10 @@ E-MTAB-2983		ERR647964	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647964	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647964	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647964	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647964	factor	single cell identifier	8	
+E-MTAB-2983		ERR647964	factor	single cell identifier	8
+E-MTAB-2983		ERR647964	factor	skin	8
+E-MTAB-2983		ERR647964	factor	age	8
+E-MTAB-2983		ERR647964	factor	bala	8
 E-MTAB-2983		ERR647965	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647965	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647965	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -197,7 +254,10 @@ E-MTAB-2983		ERR647965	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647965	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647965	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647965	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647965	factor	single cell identifier	34	
+E-MTAB-2983		ERR647965	factor	single cell identifier	34
+E-MTAB-2983		ERR647965	factor	skin	34
+E-MTAB-2983		ERR647965	factor	age	34
+E-MTAB-2983		ERR647965	factor	bala	34
 E-MTAB-2983		ERR647966	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647966	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647966	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -207,7 +267,10 @@ E-MTAB-2983		ERR647966	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647966	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647966	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647966	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647966	factor	single cell identifier	7	
+E-MTAB-2983		ERR647966	factor	single cell identifier	7
+E-MTAB-2983		ERR647966	factor	skin	7
+E-MTAB-2983		ERR647966	factor	age	7
+E-MTAB-2983		ERR647966	factor	bala	7
 E-MTAB-2983		ERR647967	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647967	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647967	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -217,7 +280,10 @@ E-MTAB-2983		ERR647967	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647967	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647967	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647967	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647967	factor	single cell identifier	22	
+E-MTAB-2983		ERR647967	factor	single cell identifier	22
+E-MTAB-2983		ERR647967	factor	skin	22
+E-MTAB-2983		ERR647967	factor	age	22
+E-MTAB-2983		ERR647967	factor	bala	22
 E-MTAB-2983		ERR647968	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647968	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647968	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -227,7 +293,10 @@ E-MTAB-2983		ERR647968	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647968	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647968	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647968	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647968	factor	single cell identifier	14	
+E-MTAB-2983		ERR647968	factor	single cell identifier	14
+E-MTAB-2983		ERR647968	factor	skin	14
+E-MTAB-2983		ERR647968	factor	age	14
+E-MTAB-2983		ERR647968	factor	bala	14
 E-MTAB-2983		ERR647969	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647969	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647969	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -237,7 +306,10 @@ E-MTAB-2983		ERR647969	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647969	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647969	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647969	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647969	factor	single cell identifier	6	
+E-MTAB-2983		ERR647969	factor	single cell identifier	6
+E-MTAB-2983		ERR647969	factor	skin	6
+E-MTAB-2983		ERR647969	factor	age	6
+E-MTAB-2983		ERR647969	factor	bala	6
 E-MTAB-2983		ERR647970	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647970	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647970	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -247,7 +319,10 @@ E-MTAB-2983		ERR647970	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647970	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647970	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647970	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647970	factor	single cell identifier	21	
+E-MTAB-2983		ERR647970	factor	single cell identifier	21
+E-MTAB-2983		ERR647970	factor	skin	21
+E-MTAB-2983		ERR647970	factor	age	21
+E-MTAB-2983		ERR647970	factor	bala	21
 E-MTAB-2983		ERR647971	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647971	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647971	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -257,7 +332,10 @@ E-MTAB-2983		ERR647971	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647971	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647971	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647971	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647971	factor	single cell identifier	25	
+E-MTAB-2983		ERR647971	factor	single cell identifier	25
+E-MTAB-2983		ERR647971	factor	skin	25
+E-MTAB-2983		ERR647971	factor	age	25
+E-MTAB-2983		ERR647971	factor	bala	25
 E-MTAB-2983		ERR647972	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647972	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647972	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -267,7 +345,10 @@ E-MTAB-2983		ERR647972	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647972	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647972	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647972	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647972	factor	single cell identifier	32	
+E-MTAB-2983		ERR647972	factor	single cell identifier	32
+E-MTAB-2983		ERR647972	factor	skin	32
+E-MTAB-2983		ERR647972	factor	age	32
+E-MTAB-2983		ERR647972	factor	bala	32
 E-MTAB-2983		ERR647973	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647973	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647973	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -277,7 +358,10 @@ E-MTAB-2983		ERR647973	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647973	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647973	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647973	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647973	factor	single cell identifier	16	
+E-MTAB-2983		ERR647973	factor	single cell identifier	16
+E-MTAB-2983		ERR647973	factor	skin	16
+E-MTAB-2983		ERR647973	factor	age	16
+E-MTAB-2983		ERR647973	factor	bala	16
 E-MTAB-2983		ERR647974	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647974	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647974	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -287,7 +371,10 @@ E-MTAB-2983		ERR647974	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647974	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647974	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647974	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647974	factor	single cell identifier	10	
+E-MTAB-2983		ERR647974	factor	single cell identifier	10
+E-MTAB-2983		ERR647974	factor	skin	10
+E-MTAB-2983		ERR647974	factor	age	10
+E-MTAB-2983		ERR647974	factor	bala	10
 E-MTAB-2983		ERR647975	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647975	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647975	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -297,7 +384,10 @@ E-MTAB-2983		ERR647975	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647975	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647975	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647975	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647975	factor	single cell identifier	35	
+E-MTAB-2983		ERR647975	factor	single cell identifier	35
+E-MTAB-2983		ERR647975	factor	skin	35
+E-MTAB-2983		ERR647975	factor	age	35
+E-MTAB-2983		ERR647975	factor	bala	35
 E-MTAB-2983		ERR647976	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647976	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647976	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -307,7 +397,10 @@ E-MTAB-2983		ERR647976	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647976	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647976	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647976	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647976	factor	single cell identifier	33	
+E-MTAB-2983		ERR647976	factor	single cell identifier	33
+E-MTAB-2983		ERR647976	factor	skin	33
+E-MTAB-2983		ERR647976	factor	age	33
+E-MTAB-2983		ERR647976	factor	bala	33
 E-MTAB-2983		ERR647977	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647977	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647977	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -317,7 +410,10 @@ E-MTAB-2983		ERR647977	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647977	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647977	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647977	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647977	factor	single cell identifier	15	
+E-MTAB-2983		ERR647977	factor	single cell identifier	15
+E-MTAB-2983		ERR647977	factor	skin	15
+E-MTAB-2983		ERR647977	factor	age	15
+E-MTAB-2983		ERR647977	factor	bala	15
 E-MTAB-2983		ERR647978	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647978	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647978	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -327,7 +423,10 @@ E-MTAB-2983		ERR647978	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647978	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647978	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647978	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647978	factor	single cell identifier	1	
+E-MTAB-2983		ERR647978	factor	single cell identifier	1
+E-MTAB-2983		ERR647978	factor	skin	1
+E-MTAB-2983		ERR647978	factor	age	1
+E-MTAB-2983		ERR647978	factor	bala	1
 E-MTAB-2983		ERR647979	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647979	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647979	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -337,7 +436,10 @@ E-MTAB-2983		ERR647979	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647979	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647979	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647979	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647979	factor	single cell identifier	11	
+E-MTAB-2983		ERR647979	factor	single cell identifier	11
+E-MTAB-2983		ERR647979	factor	skin	11
+E-MTAB-2983		ERR647979	factor	age	11
+E-MTAB-2983		ERR647979	factor	bala	11
 E-MTAB-2983		ERR647980	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647980	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647980	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -347,7 +449,10 @@ E-MTAB-2983		ERR647980	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647980	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647980	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647980	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647980	factor	single cell identifier	4	
+E-MTAB-2983		ERR647980	factor	single cell identifier	4
+E-MTAB-2983		ERR647980	factor	skin	4
+E-MTAB-2983		ERR647980	factor	age	4
+E-MTAB-2983		ERR647980	factor	bala	4
 E-MTAB-2983		ERR647981	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647981	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647981	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -357,7 +462,10 @@ E-MTAB-2983		ERR647981	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647981	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647981	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647981	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647981	factor	single cell identifier	30	
+E-MTAB-2983		ERR647981	factor	single cell identifier	30
+E-MTAB-2983		ERR647981	factor	skin	30
+E-MTAB-2983		ERR647981	factor	age	30
+E-MTAB-2983		ERR647981	factor	bala	30
 E-MTAB-2983		ERR647982	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647982	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647982	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -367,7 +475,10 @@ E-MTAB-2983		ERR647982	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647982	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647982	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647982	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647982	factor	single cell identifier	31	
+E-MTAB-2983		ERR647982	factor	single cell identifier	31
+E-MTAB-2983		ERR647982	factor	skin	31
+E-MTAB-2983		ERR647982	factor	age	31
+E-MTAB-2983		ERR647982	factor	bala	31
 E-MTAB-2983		ERR647983	characteristic	biopsy site	ovarian cortex	http://purl.obolibrary.org/obo/UBERON_0013191
 E-MTAB-2983		ERR647983	characteristic	developmental stage	adult	http://www.ebi.ac.uk/efo/EFO_0001272
 E-MTAB-2983		ERR647983	characteristic	disease	normal	http://purl.obolibrary.org/obo/PATO_0000461
@@ -377,4 +488,7 @@ E-MTAB-2983		ERR647983	characteristic	organism part	ovary	http://purl.obolibrary
 E-MTAB-2983		ERR647983	characteristic	phenotype	DDX4 antibody-positive	
 E-MTAB-2983		ERR647983	characteristic	sex	female	http://purl.obolibrary.org/obo/PATO_0000383
 E-MTAB-2983		ERR647983	characteristic	single cell quality	OK	
-E-MTAB-2983		ERR647983	factor	single cell identifier	3	
+E-MTAB-2983		ERR647983	factor	single cell identifier	3
+E-MTAB-2983		ERR647983	factor	skin	3
+E-MTAB-2983		ERR647983	factor	age	3
+E-MTAB-2983		ERR647983	factor	bala	3
diff --git a/fixtures/experiment_files/magetab/E-MTAB-2983/E-MTAB-2983.idf.txt b/tests/experiment_files/magetab/E-MTAB-2983/E-MTAB-2983.idf.txt
similarity index 100%
rename from fixtures/experiment_files/magetab/E-MTAB-2983/E-MTAB-2983.idf.txt
rename to tests/experiment_files/magetab/E-MTAB-2983/E-MTAB-2983.idf.txt
diff --git a/fixtures/experiment_files/magetab/E-MTAB-2983/E-MTAB-2983.sdrf.txt b/tests/experiment_files/magetab/E-MTAB-2983/E-MTAB-2983.sdrf.txt
similarity index 86%
rename from fixtures/experiment_files/magetab/E-MTAB-2983/E-MTAB-2983.sdrf.txt
rename to tests/experiment_files/magetab/E-MTAB-2983/E-MTAB-2983.sdrf.txt
index e96728e..895c41f 100644
--- a/fixtures/experiment_files/magetab/E-MTAB-2983/E-MTAB-2983.sdrf.txt
+++ b/tests/experiment_files/magetab/E-MTAB-2983/E-MTAB-2983.sdrf.txt
@@ -1,39 +1,38 @@
-Source Name	Comment[ENA_SAMPLE]	Characteristics[organism]	Characteristics[sex]	Characteristics[developmental stage]	Characteristics[disease]	Characteristics[individual]	Characteristics[organism part]	Characteristics[biopsy site]	Characteristics[phenotype]	Characteristics[single cell quality]	Material Type	Description	Protocol REF	Protocol REF	Performer	Extract Name	Comment[single cell isolation]	Comment[library construction]	Comment[end bias]	Comment[input molecule]	Comment[primer]	Comment[spike in]	Comment[LIBRARY_STRAND]	Comment[LIBRARY_LAYOUT]	Comment[LIBRARY_SELECTION]	Comment[LIBRARY_SOURCE]	Comment[LIBRARY_STRATEGY]	Comment[spike sequence file]	Protocol REF	Performer	Assay Name	Technology Type	Comment[ENA_EXPERIMENT]	Scan Name	Comment[SUBMITTED_FILE_NAME]	Comment[ENA_RUN]	Comment[FASTQ_URI]	Factor Value[single cell identifier]
-P25	ERS559135	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P25	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P25	sequencing assay	ERX604303	P25.fastq.gz	P25.fastq.gz	ERR647946	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647946/ERR647946.fastq.gz	24
-P6	ERS559159	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P6	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P6	sequencing assay	ERX604327	P6.fastq.gz	P6.fastq.gz	ERR647947	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647947/ERR647947.fastq.gz	5
-P28	ERS559166	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P28	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P28	sequencing assay	ERX604334	P28.fastq.gz	P28.fastq.gz	ERR647948	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647948/ERR647948.fastq.gz	27
-P21	ERS559142	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P21	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P21	sequencing assay	ERX604310	P21.fastq.gz	P21.fastq.gz	ERR647949	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647949/ERR647949.fastq.gz	20
-P18	ERS559163	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P18	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P18	sequencing assay	ERX604331	P18.fastq.gz	P18.fastq.gz	ERR647950	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647950/ERR647950.fastq.gz	17
-P3	ERS559143	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P3	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P3	sequencing assay	ERX604311	P3.fastq.gz	P3.fastq.gz	ERR647951	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647951/ERR647951.fastq.gz	2
-P14	ERS559150	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P14	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P14	sequencing assay	ERX604318	P14.fastq.gz	P14.fastq.gz	ERR647952	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647952/ERR647952.fastq.gz	13
-P29	ERS559132	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P29	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P29	sequencing assay	ERX604300	P29.fastq.gz	P29.fastq.gz	ERR647953	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647953/ERR647953.fastq.gz	28
-P24	ERS559167	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P24	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P24	sequencing assay	ERX604335	P24.fastq.gz	P24.fastq.gz	ERR647954	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647954/ERR647954.fastq.gz	23
-P20	ERS559155	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P20	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P20	sequencing assay	ERX604323	P20.fastq.gz	P20.fastq.gz	ERR647955	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647955/ERR647955.fastq.gz	19
-P41	ERS559158	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P41	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P41	sequencing assay	ERX604326	P41.fastq.gz	P41.fastq.gz	ERR647956	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647956/ERR647956.fastq.gz	38
-P13	ERS559148	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P13	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P13	sequencing assay	ERX604316	P13.fastq.gz	P13.fastq.gz	ERR647957	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647957/ERR647957.fastq.gz	12
-P27	ERS559160	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P27	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P27	sequencing assay	ERX604328	P27.fastq.gz	P27.fastq.gz	ERR647958	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647958/ERR647958.fastq.gz	26
-P40	ERS559154	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P40	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P40	sequencing assay	ERX604322	P40.fastq.gz	P40.fastq.gz	ERR647959	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647959/ERR647959.fastq.gz	37
-P19	ERS559164	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P19	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P19	sequencing assay	ERX604332	P19.fastq.gz	P19.fastq.gz	ERR647960	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647960/ERR647960.fastq.gz	18
-P30	ERS559138	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P30	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P30	sequencing assay	ERX604306	P30.fastq.gz	P30.fastq.gz	ERR647961	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647961/ERR647961.fastq.gz	29
-P39	ERS559139	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P39	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P39	sequencing assay	ERX604307	P39.fastq.gz	P39.fastq.gz	ERR647962	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647962/ERR647962.fastq.gz	36
-P10	ERS559161	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P10	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P10	sequencing assay	ERX604329	P10.fastq.gz	P10.fastq.gz	ERR647963	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647963/ERR647963.fastq.gz	9
-P9	ERS559141	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P9	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P9	sequencing assay	ERX604309	P9.fastq.gz	P9.fastq.gz	ERR647964	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647964/ERR647964.fastq.gz	8
-P36	ERS559153	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P36	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P36	sequencing assay	ERX604321	P36.fastq.gz	P36.fastq.gz	ERR647965	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647965/ERR647965.fastq.gz	34
-P8	ERS559168	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P8	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P8	sequencing assay	ERX604336	P8.fastq.gz	P8.fastq.gz	ERR647966	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647966/ERR647966.fastq.gz	7
-P23	ERS559151	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P23	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P23	sequencing assay	ERX604319	P23.fastq.gz	P23.fastq.gz	ERR647967	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647967/ERR647967.fastq.gz	22
-P15	ERS559162	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P15	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P15	sequencing assay	ERX604330	P15.fastq.gz	P15.fastq.gz	ERR647968	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647968/ERR647968.fastq.gz	14
-P7	ERS559146	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P7	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P7	sequencing assay	ERX604314	P7.fastq.gz	P7.fastq.gz	ERR647969	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647969/ERR647969.fastq.gz	6
-P22	ERS559144	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P22	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P22	sequencing assay	ERX604312	P22.fastq.gz	P22.fastq.gz	ERR647970	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647970/ERR647970.fastq.gz	21
-P26	ERS559169	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P26	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P26	sequencing assay	ERX604337	P26.fastq.gz	P26.fastq.gz	ERR647971	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647971/ERR647971.fastq.gz	25
-P34	ERS559157	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P34	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P34	sequencing assay	ERX604325	P34.fastq.gz	P34.fastq.gz	ERR647972	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647972/ERR647972.fastq.gz	32
-P17	ERS559134	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P17	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P17	sequencing assay	ERX604302	P17.fastq.gz	P17.fastq.gz	ERR647973	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647973/ERR647973.fastq.gz	16
-P11	ERS559145	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P11	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P11	sequencing assay	ERX604313	P11.fastq.gz	P11.fastq.gz	ERR647974	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647974/ERR647974.fastq.gz	10
-P37	ERS559133	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P37	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P37	sequencing assay	ERX604301	P37.fastq.gz	P37.fastq.gz	ERR647975	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647975/ERR647975.fastq.gz	35
-P35	ERS559149	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P35	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P35	sequencing assay	ERX604317	P35.fastq.gz	P35.fastq.gz	ERR647976	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647976/ERR647976.fastq.gz	33
-P16	ERS559137	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P16	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P16	sequencing assay	ERX604305	P16.fastq.gz	P16.fastq.gz	ERR647977	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647977/ERR647977.fastq.gz	15
-P1	ERS559156	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P1	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P1	sequencing assay	ERX604324	P1.fastq.gz	P1.fastq.gz	ERR647978	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647978/ERR647978.fastq.gz	1
-P12	ERS559136	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P12	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P12	sequencing assay	ERX604304	P12.fastq.gz	P12.fastq.gz	ERR647979	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647979/ERR647979.fastq.gz	11
-P5	ERS559147	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P5	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P5	sequencing assay	ERX604315	P5.fastq.gz	P5.fastq.gz	ERR647980	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647980/ERR647980.fastq.gz	4
-P31	ERS559165	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P31	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P31	sequencing assay	ERX604333	P31.fastq.gz	P31.fastq.gz	ERR647981	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647981/ERR647981.fastq.gz	30
-P33	ERS559140	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P33	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P33	sequencing assay	ERX604308	P33.fastq.gz	P33.fastq.gz	ERR647982	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647982/ERR647982.fastq.gz	31
-P4	ERS559152	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P4	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P4	sequencing assay	ERX604320	P4.fastq.gz	P4.fastq.gz	ERR647983	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647983/ERR647983.fastq.gz	3
+Source Name	Comment[ENA_SAMPLE]	Characteristics [organism]	Characteristics[sex]	Characteristics [developmental stage]	Characteristics[disease]	Characteristics[individual]	Characteristics[organism part]	Characteristics[biopsy site]	Characteristics[phenotype]	Characteristics[single cell quality]	Material Type	Description	Protocol REF	Protocol REF	Performer	Extract Name	Comment[single cell isolation]	Comment[library construction]	Comment[end bias]	Comment[input molecule]	Comment[primer]	Comment[spike in]	Comment[LIBRARY_STRAND]	Comment[LIBRARY_LAYOUT]	Comment[LIBRARY_SELECTION]	Comment[LIBRARY_SOURCE]	Comment[LIBRARY_STRATEGY]	Comment[spike sequence file]	Protocol REF	Performer	Assay Name	Technology Type	Comment[ENA_EXPERIMENT]	Scan Name	Comment[SUBMITTED_FILE_NAME]	Comment[ENA_RUN]	Comment[FASTQ_URI]	FactorValue[single cell identifier]	Factor Value[skin]	Factor Value [age]	FactorValue [bala]
+P6	ERS559159	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P6	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P6	sequencing assay	ERX604327	P6.fastq.gz	P6.fastq.gz	ERR647947	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647947/ERR647947.fastq.gz	5	5	5	5
+P28	ERS559166	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P28	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P28	sequencing assay	ERX604334	P28.fastq.gz	P28.fastq.gz	ERR647948	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647948/ERR647948.fastq.gz	27	27	27	27
+P21	ERS559142	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P21	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P21	sequencing assay	ERX604310	P21.fastq.gz	P21.fastq.gz	ERR647949	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647949/ERR647949.fastq.gz	20	20	20	20
+P18	ERS559163	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P18	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P18	sequencing assay	ERX604331	P18.fastq.gz	P18.fastq.gz	ERR647950	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647950/ERR647950.fastq.gz	17	17	17	17
+P3	ERS559143	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P3	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P3	sequencing assay	ERX604311	P3.fastq.gz	P3.fastq.gz	ERR647951	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647951/ERR647951.fastq.gz	2	2	2	2
+P14	ERS559150	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P14	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P14	sequencing assay	ERX604318	P14.fastq.gz	P14.fastq.gz	ERR647952	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647952/ERR647952.fastq.gz	13	13	13	13
+P29	ERS559132	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P29	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P29	sequencing assay	ERX604300	P29.fastq.gz	P29.fastq.gz	ERR647953	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647953/ERR647953.fastq.gz	28	28	28	28
+P24	ERS559167	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P24	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P24	sequencing assay	ERX604335	P24.fastq.gz	P24.fastq.gz	ERR647954	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647954/ERR647954.fastq.gz	23	23	23	23
+P20	ERS559155	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P20	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P20	sequencing assay	ERX604323	P20.fastq.gz	P20.fastq.gz	ERR647955	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647955/ERR647955.fastq.gz	19	19	19	19
+P41	ERS559158	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P41	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P41	sequencing assay	ERX604326	P41.fastq.gz	P41.fastq.gz	ERR647956	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647956/ERR647956.fastq.gz	38	38	38	38
+P13	ERS559148	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P13	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P13	sequencing assay	ERX604316	P13.fastq.gz	P13.fastq.gz	ERR647957	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647957/ERR647957.fastq.gz	12	12	12	12
+P27	ERS559160	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P27	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P27	sequencing assay	ERX604328	P27.fastq.gz	P27.fastq.gz	ERR647958	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647958/ERR647958.fastq.gz	26	26	26	26
+P40	ERS559154	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P40	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P40	sequencing assay	ERX604322	P40.fastq.gz	P40.fastq.gz	ERR647959	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647959/ERR647959.fastq.gz	37	37	37	37
+P19	ERS559164	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P19	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P19	sequencing assay	ERX604332	P19.fastq.gz	P19.fastq.gz	ERR647960	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647960/ERR647960.fastq.gz	18	18	18	18
+P30	ERS559138	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P30	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P30	sequencing assay	ERX604306	P30.fastq.gz	P30.fastq.gz	ERR647961	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647961/ERR647961.fastq.gz	29	29	29	29
+P39	ERS559139	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P39	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P39	sequencing assay	ERX604307	P39.fastq.gz	P39.fastq.gz	ERR647962	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647962/ERR647962.fastq.gz	36	36	36	36
+P10	ERS559161	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P10	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P10	sequencing assay	ERX604329	P10.fastq.gz	P10.fastq.gz	ERR647963	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647963/ERR647963.fastq.gz	9	9	9	9
+P9	ERS559141	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P9	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P9	sequencing assay	ERX604309	P9.fastq.gz	P9.fastq.gz	ERR647964	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647964/ERR647964.fastq.gz	8	8	8	8
+P36	ERS559153	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P36	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P36	sequencing assay	ERX604321	P36.fastq.gz	P36.fastq.gz	ERR647965	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647965/ERR647965.fastq.gz	34	34	34	34
+P8	ERS559168	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P8	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P8	sequencing assay	ERX604336	P8.fastq.gz	P8.fastq.gz	ERR647966	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647966/ERR647966.fastq.gz	7	7	7	7
+P23	ERS559151	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P23	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P23	sequencing assay	ERX604319	P23.fastq.gz	P23.fastq.gz	ERR647967	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647967/ERR647967.fastq.gz	22	22	22	22
+P15	ERS559162	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P15	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P15	sequencing assay	ERX604330	P15.fastq.gz	P15.fastq.gz	ERR647968	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647968/ERR647968.fastq.gz	14	14	14	14
+P7	ERS559146	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P7	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P7	sequencing assay	ERX604314	P7.fastq.gz	P7.fastq.gz	ERR647969	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647969/ERR647969.fastq.gz	6	6	6	6
+P22	ERS559144	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P22	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P22	sequencing assay	ERX604312	P22.fastq.gz	P22.fastq.gz	ERR647970	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647970/ERR647970.fastq.gz	21	21	21	21
+P26	ERS559169	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P26	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P26	sequencing assay	ERX604337	P26.fastq.gz	P26.fastq.gz	ERR647971	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647971/ERR647971.fastq.gz	25	25	25	25
+P34	ERS559157	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P34	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P34	sequencing assay	ERX604325	P34.fastq.gz	P34.fastq.gz	ERR647972	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647972/ERR647972.fastq.gz	32	32	32	32
+P17	ERS559134	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P17	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P17	sequencing assay	ERX604302	P17.fastq.gz	P17.fastq.gz	ERR647973	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647973/ERR647973.fastq.gz	16	16	16	16
+P11	ERS559145	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P11	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P11	sequencing assay	ERX604313	P11.fastq.gz	P11.fastq.gz	ERR647974	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647974/ERR647974.fastq.gz	10	10	10	10
+P37	ERS559133	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P37	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P37	sequencing assay	ERX604301	P37.fastq.gz	P37.fastq.gz	ERR647975	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647975/ERR647975.fastq.gz	35	35	35	35
+P35	ERS559149	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P35	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P35	sequencing assay	ERX604317	P35.fastq.gz	P35.fastq.gz	ERR647976	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647976/ERR647976.fastq.gz	33	33	33	33
+P16	ERS559137	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P16	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P16	sequencing assay	ERX604305	P16.fastq.gz	P16.fastq.gz	ERR647977	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647977/ERR647977.fastq.gz	15	15	15	15
+P1	ERS559156	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P1	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P1	sequencing assay	ERX604324	P1.fastq.gz	P1.fastq.gz	ERR647978	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647978/ERR647978.fastq.gz	1	1	1	1
+P12	ERS559136	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P12	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P12	sequencing assay	ERX604304	P12.fastq.gz	P12.fastq.gz	ERR647979	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647979/ERR647979.fastq.gz	11	11	11	11
+P5	ERS559147	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P5	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P5	sequencing assay	ERX604315	P5.fastq.gz	P5.fastq.gz	ERR647980	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647980/ERR647980.fastq.gz	4	4	4	4
+P31	ERS559165	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P31	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P31	sequencing assay	ERX604333	P31.fastq.gz	P31.fastq.gz	ERR647981	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647981/ERR647981.fastq.gz	30	30	30	30
+P33	ERS559140	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P33	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P33	sequencing assay	ERX604308	P33.fastq.gz	P33.fastq.gz	ERR647982	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647982/ERR647982.fastq.gz	31	31	31	31
+P4	ERS559152	Homo sapiens	female	adult	normal	pooled cells from two individuals, 33 and 36 years old	ovary	ovarian cortex	DDX4 antibody-positive	OK	cell	DDX4 FACS sorted single cell. FACS was performed on pooled ovarian cortical tissue from two individuals, 33 and 36 years old.	P-MTAB-41471	P-MTAB-41449	Sophie Petropoulos	P4	mouth pipetting	smart-seq2	none	polyA RNA	oligo-dT	ERCC mix 1	not applicable	SINGLE	RANDOM	TRANSCRIPTOMIC	RNA-Seq	ERCC92.fa	P-MTAB-41450	Sophie Petropoulos	P4	sequencing assay	ERX604320	P4.fastq.gz	P4.fastq.gz	ERR647983	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR647/ERR647983/ERR647983.fastq.gz	3	3	3	3
diff --git a/fixtures/experiment_files/release-metadata.json b/tests/experiment_files/release-metadata.json
similarity index 100%
rename from fixtures/experiment_files/release-metadata.json
rename to tests/experiment_files/release-metadata.json
diff --git a/fixtures/experiment_files/species-properties.json b/tests/experiment_files/species-properties.json
similarity index 100%
rename from fixtures/experiment_files/species-properties.json
rename to tests/experiment_files/species-properties.json
diff --git a/tests/random-data-set.bats b/tests/random-data-set.bats
index f573918..21e8a10 100644
--- a/tests/random-data-set.bats
+++ b/tests/random-data-set.bats
@@ -23,10 +23,38 @@
   [ "$status" -eq 0 ]
 }
 
-@test "Loading: E-MTAB-2983 through cli" {
+@test "Loading: E-CURD-4 through CLI" {
+  export ACCESSIONS=E-CURD-4
+
+  run load_experiment_web_cli.sh
+  echo "output = ${output}"
+  [ "$status" -eq 0 ]
+}
+
+@test "Loading: Check that E-CURD-4 was loaded" {
+  export EXP_ID=E-CURD-4
+  export FIELDS=species
+  species=$(get_experiment_info.sh)
+  run [ "$species" == "Arabidopsis thaliana" ]
+  echo "output = ${output}"
+  [ "$status" -eq 0 ]
+}
+
+@test "Loading: Update experiment design of E-CURD-4 after deleting file" {
+  export ACCESSIONS=E-CURD-4
+
+  expDesignFile=$EXPERIMENT_DESIGN_FILES/ExpDesign-${ACCESSIONS}.tsv
+  rm -rf $expDesignFile
+
+  run update_experiment_web_cli.sh
+
+  echo "output = ${output}"
+  [ "$status" -eq 0 ]
+  [ -f $expDesignFile ]
+}
+
+@test "Loading: E-MTAB-2983 through CLI" {
   export ACCESSIONS=E-MTAB-2983
-  export BIOENTITIES=/tmp/fixtures/
-  export EXPERIMENT_FILES=/tmp/fixtures/experiment_files
 
   run load_experiment_web_cli.sh
   echo "output = ${output}"
@@ -42,12 +70,10 @@
   [ "$status" -eq 0 ]
 }
 
-@test "Loading: Update experiment design for E-MTAB-2983 after deleting expDesign file" {
+@test "Loading: Update experiment design of E-MTAB-2983 after deleting file" {
   export ACCESSIONS=E-MTAB-2983
-  export BIOENTITIES=/tmp/fixtures/
-  export EXPERIMENT_FILES=/tmp/fixtures/experiment_files
 
-  expDesignFile=$EXPERIMENT_FILES/expdesign/ExpDesign-${ACCESSIONS}.tsv
+  expDesignFile=$EXPERIMENT_DESIGN_FILES/ExpDesign-${ACCESSIONS}.tsv
   rm -rf $expDesignFile
 
   run update_experiment_web_cli.sh
@@ -377,9 +403,18 @@
   [ "$status" -eq 0 ]
 }
 
-@test "Exp_Design: Load exp_design data" {
-  export CONDENSED_SDRF_FILE=/tmp/fixtures/experiment_files/magetab/E-MTAB-2983/E-MTAB-2983.condensed-sdrf.tsv
-  export SDRF_FILE=/tmp/fixtures/experiment_files/magetab/E-MTAB-2983/E-MTAB-2983.sdrf.txt
+@test "Exp_Design: Load exp_design data E-CURD-4" {
+  export CONDENSED_SDRF_FILE=${EXPERIMENT_FILES}/magetab/E-CURD-4/E-CURD-4.condensed-sdrf.tsv
+  export SDRF_FILE=${EXPERIMENT_FILES}/magetab/E-CURD-4/E-CURD-4.sdrf.txt
+  run load_exp_design.sh
+
+  echo "output = ${output}"
+  [ "$status" -eq 0 ]
+}
+
+@test "Exp_Design: Load exp_design data E-MTAB-2983" {
+  export CONDENSED_SDRF_FILE=${EXPERIMENT_FILES}/magetab/E-MTAB-2983/E-MTAB-2983.condensed-sdrf.tsv
+  export SDRF_FILE=${EXPERIMENT_FILES}/magetab/E-MTAB-2983/E-MTAB-2983.sdrf.txt
   run load_exp_design.sh
 
   echo "output = ${output}"
diff --git a/tests/run_tests.sh b/tests/run_tests.sh
index 02a8f18..4c00250 100755
--- a/tests/run_tests.sh
+++ b/tests/run_tests.sh
@@ -1,6 +1,6 @@
 #!/usr/bin/env bash
 
-scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )
+scriptDir=$( cd -- "$( dirname -- "${BASH_SOURCE[0]:-$0}" )" &> /dev/null && pwd )
 export testsDir=$scriptDir
 export PATH=$scriptDir/../bin:$scriptDir/../tests:$PATH
 
@@ -23,13 +23,17 @@ export EXPERIMENT_DIMRED_PATH=$testsDir/dimred
 # To test cluster loading
 export EXPERIMENT_CLUSTERS_FILE=$testsDir/marker-genes/TEST-EXP1.clusters.tsv
 
-# Make /fixtures writable.
-cp -r /fixtures /tmp/fixtures
-chmod -R a+w /tmp/fixtures/experiment_files/expdesign 
+# Make /fixtures writable
+export BIOENTITIES=$testsDir
+export EXPERIMENT_FILES=$testsDir/experiment_files
+export EXPERIMENT_DESIGN_FILES=$SCRATCH_DIR
+
+#cp -r /fixtures /tmp/fixtures
+#chmod -R a+w /tmp/fixtures/experiment_files/expdesign
 
 
 if [ "$#" -eq 0 ]; then
-	bats --tap "$(dirname "${BASH_SOURCE[0]}")"
+	bats --tap "$(dirname "${BASH_SOURCE[0]:-$0}")"
 else
 	bats random-data-set.bats
 fi