DESCRIPTION

Type: Package
Package: SingleCellMultiModal
Title: Integrating Multi-modal Single Cell Experiment datasets
Version: 1.13.13
Authors@R: c(
    person("Marcel", "Ramos", , "marcel.ramos@roswellpark.org",
        c("aut", "cre"), c(ORCID = "0000-0002-3242-0582")
    ),
    person("Ricard", "Argelaguet", , "ricard@ebi.ac.uk", "aut"),
    person("Al", "Abadi", , , "ctb"),
    person("Dario", "Righelli", , "dario.righelli@gmail.com", "aut"),
    person("Christophe", "Vanderaa", ,
        "christophe.vanderaa@uclouvain.be", "ctb"),
    person("Kelly", "Eckenrode", , "kelly.eckenrode@sph.cuny.edu", "aut"),
    person("Ludwig", "Geistlinger", ,
        "ludwig_geistlinger@hms.harvard.edu", "aut"),
    person("Levi", "Waldron", , "lwaldron.research@gmail.com", "aut")
    )
Description: SingleCellMultiModal is an ExperimentHub package
    that serves multiple datasets obtained from GEO and other sources and
    represents them as MultiAssayExperiment objects. We provide several
    multi-modal datasets including scNMT, 10X Multiome, seqFISH, CITEseq,
    SCoPE2, and others. The scope of the package is is to provide data for
    benchmarking and analysis.
License: Artistic-2.0
BugReports: https://github.com/waldronlab/SingleCellMultiModal/issues
Depends:
    R (>= 4.2.0),
    MultiAssayExperiment
Imports:
    AnnotationHub,
    BiocBaseUtils,
    BiocFileCache,
    ExperimentHub,
    graphics,
    HDF5Array,
    S4Vectors,
    SingleCellExperiment,
    SpatialExperiment,
    SummarizedExperiment,
    Matrix,
    methods,
    utils
Suggests:
    BiocStyle,
    ggplot2,
    knitr,
    RaggedExperiment,
    rmarkdown,
    scater,
    scran,
    UpSetR,
    uwot
VignetteBuilder:
    knitr
biocViews: ExperimentData, SingleCellData, ReproducibleResearch,
    ExperimentHub, GEO
Encoding: UTF-8
RoxygenNote: 7.2.3