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setup.cfg
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setup.cfg
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[metadata]
name = python-nexus
version = 2.9.1.dev0
author = Simon Greenhill and Robert Forkel
author_email = [email protected]
description = A nexus (phylogenetics) file reader (.nex, .trees)
long_description = file: README.md
long_description_content_type = text/markdown
keywords = phylogenetics nexus newick paup splitstree
license = BSD-2-Clause
license_files = LICENSE
url = https://github.com/dlce-eva/python-nexus
project_urls =
Bug Tracker = https://github.com/cldf/pycldf/issues
platforms = any
classifiers =
Development Status :: 5 - Production/Stable
Intended Audience :: Developers
Intended Audience :: Science/Research
Natural Language :: English
Operating System :: OS Independent
Topic :: Scientific/Engineering
Topic :: Scientific/Engineering :: Bio-Informatics
Topic :: Software Development :: Libraries :: Python Modules
Programming Language :: Python :: 3
Programming Language :: Python :: 3.7
Programming Language :: Python :: 3.8
Programming Language :: Python :: 3.9
Programming Language :: Python :: 3.10
Programming Language :: Python :: 3.11
Programming Language :: Python :: Implementation :: CPython
Programming Language :: Python :: Implementation :: PyPy
License :: OSI Approved :: BSD License
[options]
zip_safe = False
packages = find:
package_dir =
= src
python_requires = >=3.7
install_requires =
newick>=1.3.1
clldutils>=3.10.0
termcolor
[options.packages.find]
where = src
[options.entry_points]
console_scripts =
nexus = nexus.__main__:main
[options.extras_require]
dev =
tox
flake8
wheel>=0.36
twine
build
test =
pytest>=5
pytest-mock
pytest-cov
coverage>=4.2
[bdist_wheel]
universal = 1
[flake8]
ignore = E711,E712,D100,D101,D103,D102,D301,W503
max-line-length = 100
exclude = .tox
[tool:pytest]
minversion = 5
testpaths = tests
addopts = --cov
[easy_install]
zip_ok = false
[coverage:run]
source =
nexus
tests
[coverage:report]
show_missing = true
skip_covered = true
[tox:tox]
envlist = py37, py38, py39, py310, py311
isolated_build = true
skip_missing_interpreter = true
[testenv]
deps = .[test]
commands = pytest {posargs}