From 72bb36b5ddf6f20a92c600eb753b04bbf68844af Mon Sep 17 00:00:00 2001 From: Michal Stolarczyk Date: Thu, 28 May 2020 15:23:40 -0400 Subject: [PATCH] Update pipeline_interface.yaml --- pipeline_interface.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pipeline_interface.yaml b/pipeline_interface.yaml index 150ae91..f158917 100644 --- a/pipeline_interface.yaml +++ b/pipeline_interface.yaml @@ -3,4 +3,4 @@ pipeline_type: sample path: pipelines/bedbuncher.py input_schema: http://schema.databio.org/pipelines/bedbuncher.yaml command_template: > - {pipeline.path} --JSON-query-path {sample.JSONquery_path} --bedset-name {sample.bedset_name} {% if sample.bbconfig_path is defined %} --bedbase-config {sample.bedbase_config} {% endif %} + {pipeline.path} --JSON-query-path {sample.JSONquery_path} --bedset-name {sample.bedset_name} {% if sample.bedbase_config is defined %} --bedbase-config {sample.bedbase_config} {% endif %}