Python and R codes used to analyze amphioxus RNA-sequencing data
For reference genome sequences and analyzed RDS format files, please go to ScienceDB (https://doi.org/10.57760/sciencedb.08801). For raw read sequences, please go to the Genome Sequence Archive (https://ngdc.cncb.ac.cn/gsa) and search for accession number CRA010773.
The relevant paper is: Dai, Y., Zhong, Y., Pan, R. et al. Evolutionary origin of the chordate nervous system revealed by amphioxus developmental trajectories. Nat Ecol Evol (2024). https://doi.org/10.1038/s41559-024-02469-7 URL: https://www.nature.com/articles/s41559-024-02469-7
If you can't find relevant data feel free to drop me an email at [email protected]