Refactoring of the calibration and container module#78

Merged

jlenain merged 62 commits intocta-observatory:masterfrom guillaumegrolleron:new_structure

Oct 26, 2023

+6,662-4,328

Commits on Sep 13, 2023

clean commit history :
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test script
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add method to sort WaveformsContainer
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-waveformContainer contructor from event list
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user script for test ggroller
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change values of pp and n in fit parameters file
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improve test
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repare test
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reduce pvalue digit in label
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-add time counter to SPE fit
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add possibility to freez parameters into minuit
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begin : redesign of the SPE fit class to speed up
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new skeleton for the calibration pipeline :
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mothers class for the maker module
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mother class for the gain makers
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unchanged modeuls for the new structure
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FlatFieldSPEMaker implementation
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photostatistic maker (not re-implemented yet)
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implementation of the FFSPE fit for single run
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implementation of FF SPE gain maker
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bugfix
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update for nominal voltage data FF SPE fit from HHV
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-bugfix
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put I/O method in mother class
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add low gain in contructor (only high gain before)
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typo bugfiox
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move gain utils in one single folder
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bugfix nominal voltage fit
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Photostatistic implementation done
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cleaning : import, type, etc
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remove old SPE fit implementation
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makers : core module enhancement
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cleaning
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moving container and makers in
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folder restructuring
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cleaning after the restructuration
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unit test for chargecontainer
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test extractor utlis
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unit test CalibrationMaker and GainMakers
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unit test flatfieldSPEMakers
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unit test implementation follow up
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mv wavefomrs in makers
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Commits on Sep 14, 2023

code into WavefomContainers split into 2 parts : one for the data format,
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move charge container into makers module
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creation of mother class to charge and waveform container
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follow up : factorisation waveforms and chargs Makers
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display module
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finalisation of the refactorisation of the waveformsMaker
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Commits on Sep 15, 2023

ChargesContainers I/O
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update calibration class following COntainers changes
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bugfix according to unit tests
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docstrings container + unit test
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make container module visible
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small bugfix + fix unit test for makers
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Commits on Sep 17, 2023

docstrings makers module
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follow pre-commit hook
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set Dirac import into methods which need it
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Commits on Oct 16, 2023

first step to reimplement following ctapipe
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Commits on Oct 23, 2023

-removed the I/O method for containers
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-adapt charges extraction makers and waveform extraction
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-creation of the component module, which inherits from ctapipe.component
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-preliminary tuto script to extract charges
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