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Added final test (final version of user script before I leave) #483

Added final test (final version of user script before I leave)

Added final test (final version of user script before I leave) #483

Workflow file for this run

name: CI
# by not building all branches on push, we avoid the duplicated builds in PRs
on:
push:
# TODO
# Remove comment: just a test to force CI on push
# branches:
# - main
# tags:
# - '**'
pull_request:
env:
NUMBA_NUM_THREADS: 1
MPLBACKEND: Agg
PYTEST_ADDOPTS: --color=yes
jobs:
lint:
runs-on: ubuntu-latest
name: Lint
steps:
- name: Check out source repository
uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Set up Python environment
uses: actions/setup-python@v5
with:
python-version: "3.9"
- name: Runs pre-commit hooks
uses: pre-commit/[email protected]
with:
extra_args: --files $(git diff origin/main --name-only)
tests:
runs-on: ${{ matrix.os }}
needs: lint
strategy:
matrix:
include:
- os: "ubuntu-latest"
python-version: "3.9"
ctapipe-version: "v0.19.3"
install-method: "mamba"
- os: "ubuntu-latest"
python-version: "3.10"
ctapipe-version: "v0.19.3"
install-method: "mamba"
- os: "ubuntu-latest"
python-version: "3.10"
ctapipe-version: "v0.19.3"
install-method: "pip"
- os: "ubuntu-latest"
python-version: "3.11"
ctapipe-version: "v0.19.3"
install-method: "mamba"
- os: "ubuntu-latest"
python-version: "3.11"
ctapipe-version: "v0.19.3"
install-method: "pip"
# macos 14 image is arm64 based
- os: "macos-14"
python-version: "3.11"
ctapipe-version: "v0.19.3"
install-method: "mamba"
defaults:
run:
# We need login shells (-l) for micromamba to work.
shell: bash -leo pipefail {0}
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Set Python version
env:
PYTHON_VERSION: ${{ matrix.python-version }}
run: |
sed -i -e "s/- python=.*/- python=$PYTHON_VERSION/g" environment.yml
- name: Mamba setup
if: matrix.install-method == 'mamba'
uses: mamba-org/setup-micromamba@v2
with:
environment-name: "ci"
environment-file: environment.yml
- name: Python setup
if: matrix.install-method == 'pip'
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
check-latest: true
- name: Install dependencies
env:
CTAPIPE_VERSION: ${{ matrix.ctapipe-version }}
run: |
python --version
echo "Installing additional pip packages"
# we install ctapipe using pip to be able to select any commit, e.g. the current main
pip install \
"git+https://github.com/cta-observatory/ctapipe@$CTAPIPE_VERSION"
echo "pip install -e ."
pip install -e .[test]
- name: Tests
run: |
pytest -n auto --dist loadscope --cov=nectarchain --cov-report=xml --ignore=src/nectarchain/user_scripts
- uses: codecov/codecov-action@v4
docs:
needs: lint
permissions:
contents: write
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: 3.9
- name: Install doc dependencies
run: |
pip install -e .[docs]
# git describe --tags
python -c 'import nectarchain; print(nectarchain.__version__)'
- name: Build docs
run: make -C docs html