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preprocess: Image failing to unmount #366

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wasciutto opened this issue Apr 10, 2023 · 0 comments
Open

preprocess: Image failing to unmount #366

wasciutto opened this issue Apr 10, 2023 · 0 comments
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bug Something isn't working preprocess

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@wasciutto
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Getting a cleanup error here causing the preprocess job to fail after fMRIPrep completes:

INFO: Cleanup error: while unmounting /var/apptainer/mnt/session/underlay/usr directory: device or resource busy, while unmounting /var/apptainer/mnt/session/final directory: device or resource busy

I have no idea if this is a longleaf issue or not. The issue happened in both 1.8 and 1.4 of clpipe. /work was added in 1.8, which is a likely culprit here, but it doesn't quite add up with 1.4 having the same issue. Maybe some sort of caching issue with Singularity caused by adding the work directory.

@wasciutto wasciutto added the bug Something isn't working label Apr 10, 2023
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