Release Notes

Current Version (1.2.0)

• Fixed bug with sorting
• Switched to use of Numpy arrays to store phage metadata rather than dictionaries of lists.

Version 1.0.1

• Improved sorting/selection possibilities for final phage selection before building the Nexus file

Version 0.1.10

• Parallel processing on the biggest bottleneck of the workflow (building each phage's nexus string of 0s and 1s for each pham present in any of the phages being compared)

Version 0.1.9

• seafaculty.desktop file added to allow SEA-PHAGES faculty to double-click to run the application

Version 0.1.8

• MacOS and Linux versions can synchronize their local databases with Hatfull server databases (e.g. if using local database Actino_Draft, the user will be prompted whether they'd like to check for updates at the Hatfull server; if the version is 1+ versions behind Actino_Draft hosted on the Hatfull server, user will be asked if they want to download and apply updates before choosing phages/hosts/clusters to compare)

Version 0.1.7

• Fixed draft exclusion such that gbk and final status genomes are now counted as non-draft

Version 0.1.6

• Can now exclude draft genomes from comparison

Version 0.1.5

• Revamped algorithm runs 2x faster

Version 0.1.4

• MacOS application bundle can now update itself (check for updates and download them if asked to)

Version 0.1.3

• First MacOS standalone application

Version 0.1.2

• First "bug-free" version - limited use cases

Version 0.1.1

• GUI logic "done"