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out.homolog_prediction.gff3为空 #32

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linshengnan09 opened this issue Dec 25, 2023 · 2 comments
Open

out.homolog_prediction.gff3为空 #32

linshengnan09 opened this issue Dec 25, 2023 · 2 comments

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@linshengnan09
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陈老师您好！我用geta注释基因组，最后跑出的结果中同源预测的结果文件out.homolog_prediction.gff3为空。查看了日志文件，没有发现报错，同时也去out.tmp/4.homolog文件夹中查看相关日志，也是没有报错信息，homolog_gene_region.tab文件是正常的，但是genewise.gff、genewise.gff3、genewise.start_stop_hints.gff以及genewise.gene_id_with_stop_codon.txt文件都是空的。请问这个是哪里出了问题，应该怎么解决呢？期待您的回复！谢谢！
@Last237
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Last237 commented Apr 6, 2024

您好，我也遇到了同样的问题，并且最后基因预测的结果相比近缘种来说差异较大，请问您后来发现是什么原因引起的了吗？感谢！

@linshengnan09
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linshengnan09 commented Apr 6, 2024 via email

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@linshengnan09 @Last237