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Step 6: CombineGeneModels #6.1 出现问题 #30

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QuintoHe opened this issue Nov 21, 2023 · 0 comments
Open

Step 6: CombineGeneModels #6.1 出现问题 #30

QuintoHe opened this issue Nov 21, 2023 · 0 comments

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@QuintoHe
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陈老师你好!我在执行geta到step6的6.1(第一轮基因预测结果整合:以AUGUSTUS结果为主,进行三种基因预测结果的整合)的cmdString3遇到问题,具体如下。
Step 6: CombineGeneModels
~/biosoft/geta-2.6.1/bin/GFF3Clear --genome ~/workspace/annotation/output.tmp/genome.fasta --no_attr_add --coverage 0.8 combine.2.gff3 > geneModels.b.gff3 2> /dev/null
问题是这一步花了很多个小时都跑不完,卡在这里,导致后续流程走不了。请问这是正常的吗,如果尝试跑了很久都跑不完,请问能把geneModels.b.gff3相关的代码注释掉,从而完成流程吗。

祝好!

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